Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698489

Identifier: 126698489

GI number: 126698489

Start: 1096496

End: 1096825

Strand: Direct

Name: 126698489

Synonym: CD0912

Alternate gene names: NA

Gene position: 1096496-1096825 (Clockwise)

Preceding gene: 126698488

Following gene: 126698490

Centisome position: 25.56

GC content: 29.39

Gene sequence:

>330_bases
ATGAGTGTAGCATTACAATTCATAGACACAAAAGACTTAGTACAAGAGCTAATGCAAAGAGATGATACAACAGACATCAT
CAAGATGTTTTTAGATAGAGAAGGAATTAAAAGGATGGAGTTAATGACTATAGAAGAATTTTGTGAGTACTTGAAAATAT
CTGATGTAACAGCTAGAAACATGGCAAGAGAAGCCATGATAACAAAAGATTTTATTGCTTTAAAAATAGGAAGAAAGTAC
ATGATTGATAGAATATCATTTGAAGAATTTATTATGAAAAATGCAATGAAAGATAAAGATGTAATGAAAAAAAGAAAGGG
GGTGATTTAG

Upstream 100 bases:

>100_bases
GAAAATAAAAATCCAACTATAGATACATTAATAAAAATAGCTGACTATTTAGACGTTACATTAGACGAACTAGTTGGAAG
ATAGAAGGGGTGAGATAAAA

Downstream 100 bases:

>100_bases
TTGAATGTAAGAGTACTAATAGCTTATGTACAATTCTGTAAGCAATATAATAAGAATGCAAGTTTTGAAGGTCTTAAAAA
ATACAACAAAGGGGTAATTG

Product: phage DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSVALQFIDTKDLVQELMQRDDTTDIIKMFLDREGIKRMELMTIEEFCEYLKISDVTARNMAREAMITKDFIALKIGRKY
MIDRISFEEFIMKNAMKDKDVMKKRKGVI

Sequences:

>Translated_109_residues
MSVALQFIDTKDLVQELMQRDDTTDIIKMFLDREGIKRMELMTIEEFCEYLKISDVTARNMAREAMITKDFIALKIGRKY
MIDRISFEEFIMKNAMKDKDVMKKRKGVI
>Mature_108_residues
SVALQFIDTKDLVQELMQRDDTTDIIKMFLDREGIKRMELMTIEEFCEYLKISDVTARNMAREAMITKDFIALKIGRKYM
IDRISFEEFIMKNAMKDKDVMKKRKGVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12955; Mature: 12823

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
10.1 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
9.3 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVALQFIDTKDLVQELMQRDDTTDIIKMFLDREGIKRMELMTIEEFCEYLKISDVTARN
CCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHH
MAREAMITKDFIALKIGRKYMIDRISFEEFIMKNAMKDKDVMKKRKGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
SVALQFIDTKDLVQELMQRDDTTDIIKMFLDREGIKRMELMTIEEFCEYLKISDVTARN
CCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHH
MAREAMITKDFIALKIGRKYMIDRISFEEFIMKNAMKDKDVMKKRKGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA