| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698485
Identifier: 126698485
GI number: 126698485
Start: 1094548
End: 1095342
Strand: Direct
Name: 126698485
Synonym: CD0908
Alternate gene names: NA
Gene position: 1094548-1095342 (Clockwise)
Preceding gene: 126698484
Following gene: 126698486
Centisome position: 25.51
GC content: 28.81
Gene sequence:
>795_bases ATGAATAACTTACAAGTAATAGAAAGAAATAACGAAAGAGTTTTAACTACACAGCAACTAGCAGATGTATATGAAACTGA TGTAAATAATATACAAGCTAATTTTAACAGAAACAAAGATAGATTTAAGGAAAATATACACTATTTTTTATTGCAAGGCG AGTATCTCAAAGAGTTTAAAAACCAACCTACTAATAGTCAGTTGGTTTCAAAACATTCTAGTCAATTATATCTTTGGACT GAAAGAGGAGCAAATAGACACTGCAAAATATTGGACACTGATAAAGCTTGGGAGCAGTTTGATAACTTAGAAGAAACATA TTTCAAAGTTAAGCAACATAAGCCAACTTGTATAGAAGATGTATTAATAGAAAGTTTAAAAGAAATGAAAGATTTAAGAC TTCAAGTTAATCAAGCAAATAGCATTGCTTTAGAAGCAAAGACAGAGGTTGAAACAATAAAAGATGTAGTTTCATTAGAC TCAAATAGTTGGAGAACAAATACACATCAACTAATTGCAAGAATAGCAAAAAAACAAGGTGGTTTTGAACATATAAATAT GCTTAGAACAGAAAGTTATGAATTATTAAATAAGAGATTTGGAGTTGACCTACATAGAAGATTAATCAATAAAAGAAGAA AAATGGCAGAAGAAGGTGTATCTGAATCTAAAAGAGAGAAAGTTAACAATTTAGATGTAATACAAGATGATAAGAAGCTA ATAGAGGGGTATGTGGCTATTGTAAAAGATATGGCTTTAAAATATGGAATATCAAGTGATTTAAGCAAAAATTAG
Upstream 100 bases:
>100_bases AGGATTTTTGGAGAAATTTAAAAATACATTCCCAAATGAAGATATGAACATTTTTTTTAAACAATAATATCACTTAAAGT GATGTAAGGAGGATTATAAA
Downstream 100 bases:
>100_bases GTTAAATCATAACAGTACCTTGAAAATTAAATACAGAATATTTTGAAAAGGAGTGGTTAAATTGAATAAAGAAAAAATGG CAGAATTTTATTCTTCAAAA
Product: phage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFKNQPTNSQLVSKHSSQLYLWT ERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIEDVLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLD SNSWRTNTHQLIARIAKKQGGFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL IEGYVAIVKDMALKYGISSDLSKN
Sequences:
>Translated_264_residues MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFKNQPTNSQLVSKHSSQLYLWT ERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIEDVLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLD SNSWRTNTHQLIARIAKKQGGFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL IEGYVAIVKDMALKYGISSDLSKN >Mature_264_residues MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFKNQPTNSQLVSKHSSQLYLWT ERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIEDVLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLD SNSWRTNTHQLIARIAKKQGGFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL IEGYVAIVKDMALKYGISSDLSKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30990; Mature: 30990
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFK CCCCEEEECCCCEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHCHHEEEEECHHHHHHC NQPTNSQLVSKHSSQLYLWTERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIED CCCCCHHHHHHCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH VLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLDSNSWRTNTHQLIARIAKKQG HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC GFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHH IEGYVAIVKDMALKYGISSDLSKN HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFK CCCCEEEECCCCEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHCHHEEEEECHHHHHHC NQPTNSQLVSKHSSQLYLWTERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIED CCCCCHHHHHHCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH VLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLDSNSWRTNTHQLIARIAKKQG HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC GFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHH IEGYVAIVKDMALKYGISSDLSKN HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA