| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698484
Identifier: 126698484
GI number: 126698484
Start: 1094326
End: 1094514
Strand: Direct
Name: 126698484
Synonym: CD0907A
Alternate gene names: NA
Gene position: 1094326-1094514 (Clockwise)
Preceding gene: 126698479
Following gene: 126698485
Centisome position: 25.51
GC content: 25.4
Gene sequence:
>189_bases ATGAAAGAGTTATCAAAGTTTAGAAAAAATTTAGGATTAACCCAGAAGCAATTAGCTGAAAGAATAGGCATATCTAAGTC TTATTATTCAAAGATAGAAGGAAATTTTAAAAAACCAGGAAGAGGATTTTTGGAGAAATTTAAAAATACATTCCCAAATG AAGATATGAACATTTTTTTTAAACAATAA
Upstream 100 bases:
>100_bases TTTTTTTAAAAAACTTCACGAAAAGAGATAAAAAGTCTTGACTATATTCACTTAAAGTGATATTATTAATTTATCACAAA TAGTGAAGGCGAGGTGTAAC
Downstream 100 bases:
>100_bases TATCACTTAAAGTGATGTAAGGAGGATTATAAAATGAATAACTTACAAGTAATAGAAAGAAATAACGAAAGAGTTTTAAC TACACAGCAACTAGCAGATG
Product: phage regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MKELSKFRKNLGLTQKQLAERIGISKSYYSKIEGNFKKPGRGFLEKFKNTFPNEDMNIFFKQ
Sequences:
>Translated_62_residues MKELSKFRKNLGLTQKQLAERIGISKSYYSKIEGNFKKPGRGFLEKFKNTFPNEDMNIFFKQ >Mature_62_residues MKELSKFRKNLGLTQKQLAERIGISKSYYSKIEGNFKKPGRGFLEKFKNTFPNEDMNIFFKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7351; Mature: 7351
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELSKFRKNLGLTQKQLAERIGISKSYYSKIEGNFKKPGRGFLEKFKNTFPNEDMNIFF CCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEE KQ CC >Mature Secondary Structure MKELSKFRKNLGLTQKQLAERIGISKSYYSKIEGNFKKPGRGFLEKFKNTFPNEDMNIFF CCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEE KQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA