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The map label for this gene is ydfM [H]

Identifier: 126698479

GI number: 126698479

Start: 1086376

End: 1087242

Strand: Direct

Name: ydfM [H]

Synonym: CD0902

Alternate gene names: 126698479

Gene position: 1086376-1087242 (Clockwise)

Preceding gene: 126698478

Following gene: 126698484

Centisome position: 25.32

GC content: 28.26

Gene sequence:

>867_bases
ATGGATAACTATAAGAAAGTGAAGCAAGTATTGTGGATAATTTTATTTGCTAATTTTGCAGTAGCATTATTAAAAATCAT
TATTGGTAATCAAATAAAAAGCTATAGTATGACAGCAGACGGATTTCATTCTTTGTCAGATGGAGCATCTAATATAGTGG
GGCTTATAGGTATTTTCTTTGCATCTAAACCAAAAGATAAAAATCATCCTTATGGACATAAAAAGTTTGAAATTATAACC
AGTTTATTTATAAGTGGAATGTTGTTTGTTATAGCAATTAAGATAATTCTTAGTGCAGTGTTAAGAATAGCTAATCCAGT
TGTACCTGCTATAACTATAGAAAGTTTAATTGCTTTAATTATTACACTTTTTATAAATATTTTTGTATGCATGTATGAAT
ATAGAATTGGTACTAAACTAAATAGTTATGTTTTGATTTCGGATTCATTGCATACAAGAAGTGATATATTTGTGTCTCTA
GGTGTATTGGTTACTTTAGTTGGTGTTAAGTTAGGATTTCCAGTAATAATAGAATCTATAGTTCCTATTATTATTTCTGC
ATTCATAATTTATTCGGCTTATGGAATATTTAGGCCATCTATTGGAATTTTGGTCGATAGAGTGGCTGTAGATGAGGATT
ATATAAAAGAAATTGTGTTTGAATTTAATGAGGTAAGGGATGTTCACAATATCAGAAGTAGAGGTAGCAAAAGTTCTATT
TATATTGACATGCATGTAATGGTAGACCCATTTATAAGCGTAGAGCAATCTCATGATTTAACACATAAAATTGAGAAACA
AATACAAGAAGAAATTAATGAAAATGCTCAAGTAATAGTCCATATTGAACCTTTTTATAGTTTTTAA

Upstream 100 bases:

>100_bases
TATAAATATAGTAAATGTGCTTATATACGATTTTATTGTCTGGTTGATTGATATTGATAGATAGCTTTCTTTATTGAATC
GAAGGGAGGGGGAATTTGTT

Downstream 100 bases:

>100_bases
CTTAGCTATAAAATACAAGTTATAAAAAAATATAATTTATAAAAAAAATATTATACCATAAATAATTTATAAAAATTATT
TATGGTATAATATTTTCTAT

Product: cation efflux rotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDNYKKVKQVLWIILFANFAVALLKIIIGNQIKSYSMTADGFHSLSDGASNIVGLIGIFFASKPKDKNHPYGHKKFEIIT
SLFISGMLFVIAIKIILSAVLRIANPVVPAITIESLIALIITLFINIFVCMYEYRIGTKLNSYVLISDSLHTRSDIFVSL
GVLVTLVGVKLGFPVIIESIVPIIISAFIIYSAYGIFRPSIGILVDRVAVDEDYIKEIVFEFNEVRDVHNIRSRGSKSSI
YIDMHVMVDPFISVEQSHDLTHKIEKQIQEEINENAQVIVHIEPFYSF

Sequences:

>Translated_288_residues
MDNYKKVKQVLWIILFANFAVALLKIIIGNQIKSYSMTADGFHSLSDGASNIVGLIGIFFASKPKDKNHPYGHKKFEIIT
SLFISGMLFVIAIKIILSAVLRIANPVVPAITIESLIALIITLFINIFVCMYEYRIGTKLNSYVLISDSLHTRSDIFVSL
GVLVTLVGVKLGFPVIIESIVPIIISAFIIYSAYGIFRPSIGILVDRVAVDEDYIKEIVFEFNEVRDVHNIRSRGSKSSI
YIDMHVMVDPFISVEQSHDLTHKIEKQIQEEINENAQVIVHIEPFYSF
>Mature_288_residues
MDNYKKVKQVLWIILFANFAVALLKIIIGNQIKSYSMTADGFHSLSDGASNIVGLIGIFFASKPKDKNHPYGHKKFEIIT
SLFISGMLFVIAIKIILSAVLRIANPVVPAITIESLIALIITLFINIFVCMYEYRIGTKLNSYVLISDSLHTRSDIFVSL
GVLVTLVGVKLGFPVIIESIVPIIISAFIIYSAYGIFRPSIGILVDRVAVDEDYIKEIVFEFNEVRDVHNIRSRGSKSSI
YIDMHVMVDPFISVEQSHDLTHKIEKQIQEEINENAQVIVHIEPFYSF

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=271, Percent_Identity=25.830258302583, Blast_Score=84, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6325032, Length=223, Percent_Identity=25.5605381165919, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323831, Length=231, Percent_Identity=25.5411255411255, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32413; Mature: 32413

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure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EEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]