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The map label for this gene is ybbK [C]

Identifier: 126698458

GI number: 126698458

Start: 1058654

End: 1059697

Strand: Direct

Name: ybbK [C]

Synonym: CD0881

Alternate gene names: 126698458

Gene position: 1058654-1059697 (Clockwise)

Preceding gene: 126698457

Following gene: 126698459

Centisome position: 24.68

GC content: 30.94

Gene sequence:

>1044_bases
ATGGGTACTAAAATTGTTTTAAGTATTGTATTAATAGTAGTAGTCGTAGCAATAAGTTTAACTTGTATAAGAGTTATAAA
ACAATCTAAAGTAGGTATAATAATGAGACTTGGTAAGTTTCAAAAAGTGGCTGAAACAGGTGTACATTTCTTAATACCAT
TTTTAGATAAAATGGCATATGTAATTGACCTTAGAGAAATTGTAATAGATTTTCCACCTCAACCAGTTATAACTAAAGAT
AATGTAACTATGCAGATTGATACAGTTGTATATTATAAAGTTACAGACCCAGTTAGATATGTGTTTGAGATAGCTAATCC
AATAGCTGCTATTGAAAATTTAACAGCTACAACACTAAGAAATATAATTGGTGAACTTGATTTAGATGAAACATTAACAT
CAAGAGATATAATAAATGTAAAAATGAGAACTATTCTTGATGAAGCAACAGATAAATGGGGTATAAAAGTAAATAGAGTA
GAGTTAAAAAATATAATGCCTCCTCAGGATATTCAAGTTGCAATGGAAAAACAAATGAGAGCAGAAAGAGAAAGAAGAGA
GGCAATACTTCAAGCAGAAGGTAATAAGTCAGCTGCAATACTTCAAGCTGAAGGTGAAAAACAATCTGCTATATTAACAG
CAGAAGCCAAAAAAGAAGCTATGGTACGTGTAGCAGAAGGTGAAAAAGAATCTGCTATATTAGTGGCAGAAGGTGAAGCT
GAAGCTATAAGACAGACAGCTATTGCTAAGGCACAAGGTGAAGCTGAAATGATAAAAAGAACTCAAATGGCAACAGCAGA
AGGTTTAAAATTAGTTTTTTCAGCAATGAAAGAGGCTGATATAGACAATAATATTCTAGCATTAAAATCTATGGAAGCTC
TTGAAAAAATGGCTGAAGGTAAGTCAACAAAACTGGTTTTACCTTCAGAAGCAGTTAATTTCCTAGGAACATTCAAAGGA
ATAAAGGAAGTTATGAGTGATGATAACAAAGAAGTACTTGATATAAAAGAAGTTTTAAATGATAATGAATCATTAAAAAA
ATAA

Upstream 100 bases:

>100_bases
CAGTAGAAGTATTAAAAATTGAAGGGGTAAAATTAGTTGTTAAAAAAGTAGACGCCACAGTTAATGTGACAAACCAATAG
AATAAAGGAGGATTTATAGT

Downstream 100 bases:

>100_bases
AAGAGTTTTGTTATCATAGGAAGGATATGGAAATTAAAGGTCGAATTAATTAAATATAGCACAAAAATGCACGTTGAAAA
GAAGAGGACTTATAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MGTKIVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAYVIDLREIVIDFPPQPVITKD
NVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLRNIIGELDLDETLTSRDIINVKMRTILDEATDKWGIKVNRV
ELKNIMPPQDIQVAMEKQMRAERERREAILQAEGNKSAAILQAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEA
EAIRQTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEGKSTKLVLPSEAVNFLGTFKG
IKEVMSDDNKEVLDIKEVLNDNESLKK

Sequences:

>Translated_347_residues
MGTKIVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAYVIDLREIVIDFPPQPVITKD
NVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLRNIIGELDLDETLTSRDIINVKMRTILDEATDKWGIKVNRV
ELKNIMPPQDIQVAMEKQMRAERERREAILQAEGNKSAAILQAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEA
EAIRQTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEGKSTKLVLPSEAVNFLGTFKG
IKEVMSDDNKEVLDIKEVLNDNESLKK
>Mature_346_residues
GTKIVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAYVIDLREIVIDFPPQPVITKDN
VTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLRNIIGELDLDETLTSRDIINVKMRTILDEATDKWGIKVNRVE
LKNIMPPQDIQVAMEKQMRAERERREAILQAEGNKSAAILQAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEAE
AIRQTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEGKSTKLVLPSEAVNFLGTFKGI
KEVMSDDNKEVLDIKEVLNDNESLKK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=270, Percent_Identity=35.5555555555556, Blast_Score=169, Evalue=2e-42,
Organism=Homo sapiens, GI38016911, Length=198, Percent_Identity=40.4040404040404, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI21686995, Length=208, Percent_Identity=36.5384615384615, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI221316744, Length=208, Percent_Identity=36.5384615384615, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI7657615, Length=183, Percent_Identity=28.4153005464481, Blast_Score=96, Evalue=7e-20,
Organism=Escherichia coli, GI1786697, Length=322, Percent_Identity=36.6459627329193, Blast_Score=211, Evalue=8e-56,
Organism=Escherichia coli, GI1790616, Length=213, Percent_Identity=25.8215962441315, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790617, Length=268, Percent_Identity=24.6268656716418, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564147, Length=232, Percent_Identity=40.0862068965517, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17569493, Length=192, Percent_Identity=38.0208333333333, Blast_Score=136, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI193209764, Length=192, Percent_Identity=38.0208333333333, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI193210507, Length=196, Percent_Identity=39.7959183673469, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17570161, Length=196, Percent_Identity=39.7959183673469, Blast_Score=124, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17569499, Length=200, Percent_Identity=35.5, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71987612, Length=197, Percent_Identity=37.0558375634518, Blast_Score=124, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI32566490, Length=196, Percent_Identity=35.7142857142857, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI25153583, Length=197, Percent_Identity=37.0558375634518, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71987621, Length=238, Percent_Identity=34.453781512605, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71989948, Length=156, Percent_Identity=37.1794871794872, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71989955, Length=156, Percent_Identity=37.1794871794872, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17569497, Length=196, Percent_Identity=32.1428571428571, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI17570459, Length=203, Percent_Identity=34.9753694581281, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45550506, Length=207, Percent_Identity=36.7149758454106, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI45556022, Length=203, Percent_Identity=36.9458128078818, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI281365664, Length=198, Percent_Identity=39.3939393939394, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI62484448, Length=198, Percent_Identity=39.3939393939394, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24657857, Length=198, Percent_Identity=39.3939393939394, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI62484274, Length=198, Percent_Identity=39.3939393939394, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI28573263, Length=199, Percent_Identity=36.1809045226131, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI18860517, Length=196, Percent_Identity=36.734693877551, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21356845, Length=196, Percent_Identity=30.6122448979592, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281361631, Length=200, Percent_Identity=29.5, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281361633, Length=200, Percent_Identity=29.5, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281361635, Length=136, Percent_Identity=32.3529411764706, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 38512; Mature: 38380

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKIVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VIDLREIVIDFPPQPVITKDNVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLR
HHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
NIIGELDLDETLTSRDIINVKMRTILDEATDKWGIKVNRVELKNIMPPQDIQVAMEKQMR
HHHCCCCCHHHHHCCHHHHHHHHHHHHHHCHHCCCEEEEEECCCCCCCHHHHHHHHHHHH
AERERREAILQAEGNKSAAILQAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEA
HHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCH
EAIRQTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCC
KSTKLVLPSEAVNFLGTFKGIKEVMSDDNKEVLDIKEVLNDNESLKK
CCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
GTKIVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VIDLREIVIDFPPQPVITKDNVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLR
HHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
NIIGELDLDETLTSRDIINVKMRTILDEATDKWGIKVNRVELKNIMPPQDIQVAMEKQMR
HHHCCCCCHHHHHCCHHHHHHHHHHHHHHCHHCCCEEEEEECCCCCCCHHHHHHHHHHHH
AERERREAILQAEGNKSAAILQAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEA
HHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCH
EAIRQTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCC
KSTKLVLPSEAVNFLGTFKGIKEVMSDDNKEVLDIKEVLNDNESLKK
CCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]