The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698418

Identifier: 126698418

GI number: 126698418

Start: 1014397

End: 1014708

Strand: Direct

Name: 126698418

Synonym: CD0838

Alternate gene names: NA

Gene position: 1014397-1014708 (Clockwise)

Preceding gene: 126698417

Following gene: 126698419

Centisome position: 23.64

GC content: 28.53

Gene sequence:

>312_bases
ATGGGTATATTTAAAACAAAAATGGATGAGGACTGGAAAGTAAACTACATTAAAGAGTTTAATGAAATGAGAGATTCTTA
TGAGAGTAAACTTCAAAAAAAACAGTTTGAGGTAGATAGTTTGAAATCAGAATTGGATAGACTAAGAAGCTATAAAAATA
GCCTTAAGCCAAAAGAAAAACAAATTACTGATGATGATATAAATAATATAAAGAGTTTAAGAAGAGATGGCTTAAGCTAT
AAAGAAATTTCAAATCAAACAAGTTGGAGCAAAGCAACTGTAAGTAGGGTATTAAATGGACTTTACGATTAG

Upstream 100 bases:

>100_bases
TTATCTAGGGGTTATGTACAAGGATTTTAAAGATAAATATAGAAATTAATGTTTATAATCGATACATAACTTGAGTAACA
AAATTTAAGGAGGTTAAAGT

Downstream 100 bases:

>100_bases
CATATACATGGGGTGATTTAAATTGGGATGAAGTATAGTTACAAAAAATGCATAATAGATTCTATTTTATTGATGTTTAT
AGTTCAAATATTAAGGATGA

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNIKSLRRDGLSY
KEISNQTSWSKATVSRVLNGLYD

Sequences:

>Translated_103_residues
MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNIKSLRRDGLSY
KEISNQTSWSKATVSRVLNGLYD
>Mature_102_residues
GIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNIKSLRRDGLSYK
EISNQTSWSKATVSRVLNGLYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12279; Mature: 12148

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QITDDDINNIKSLRRDGLSYKEISNQTSWSKATVSRVLNGLYD
CCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QITDDDINNIKSLRRDGLSYKEISNQTSWSKATVSRVLNGLYD
CCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA