| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698403
Identifier: 126698403
GI number: 126698403
Start: 998377
End: 999138
Strand: Direct
Name: 126698403
Synonym: CD0823
Alternate gene names: NA
Gene position: 998377-999138 (Clockwise)
Preceding gene: 126698402
Following gene: 126698404
Centisome position: 23.27
GC content: 33.46
Gene sequence:
>762_bases TTGCTTGATATAATTTCATGTGAATTTTCAAAACTCAAGCGGTTAAAATTTATACTGATTTCTATTTTAGGTGCTTGCTT ATTTCCAATTCCCGCAACAATTTTGATTGCAAAGGATAACTTGCCCTTTGAGCAATTGTTCAAATTAGTTGTCAATTTTG GATATTTTTTGCTATTACCAATTGTATTAAGTATTGTTGCTAGCCAACTATTTTTTATAGAAAGAGATAATGATGTATTA AAAAATCTTGCAACAGTGCCAGTGCAAAAAGGAAAACTGGCTCTGGCAAAATTGGCTGTGTTGCTGTTTATATCATTGTT CTACTCTGTTGCAGGGTTAGGAGCTACTATCATTGGAGGTTTCATTGTTGGAATAGTAGAGGGGGTTGCTGTAAAATTAG GAATGAGCATTGCTTTTGGAATTATGTTTTTTGTTACTGTACTTCCTGTTGTGGTACTCATTGTATATTTCAATCGCAGC TATATTTTTTCTATTATACTTTCTTTTGTATATGCTATTTTCAATTTTAGTATATCCTTAAATATTATCAATTTTGAACC AAATAACCCAATATTAAGTGTATTACCTGCTCCTGTTATAATGCGTTGGTGGATGGCATTTTGGGGAGATCCCACTGGCG AATACACGGCACTTAGACAGCCATATTTGCTCTCAACTCCTGCTTGTGTAGGTATTTTATGTTTGATAACCATTATAGCA GTCCTGCTGATTTGTATGATATACAAAAAGCAGGAGAATTAG
Upstream 100 bases:
>100_bases AATCGTGCTTTCATTCTAAACAACATTGAGGTATCAGAATCTCATTTATGCGAAGATACTCTTGAAGATTACTTCAAGAA AGTAACAGGGGGTGAAGGAA
Downstream 100 bases:
>100_bases GAGGTATCTATGCTTGATATAATTACTACAGAATTTCAAAAAATAAAAAGATATAATATTCTATGGATTGGTGTTGTTGC TGTTCTGTTTTCAGCACTAT
Product: lantibiotic ABC transporter permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVASQLFFIERDNDVL KNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRS YIFSIILSFVYAIFNFSISLNIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA VLLICMIYKKQEN
Sequences:
>Translated_253_residues MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVASQLFFIERDNDVL KNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRS YIFSIILSFVYAIFNFSISLNIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA VLLICMIYKKQEN >Mature_253_residues MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVASQLFFIERDNDVL KNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRS YIFSIILSFVYAIFNFSISLNIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA VLLICMIYKKQEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28100; Mature: 28100
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLP CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH IVLSIVASQLFFIERDNDVLKNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGG HHHHHHHHHHHHEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRSYIFSIILSFVYAIFNFSISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE NIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA EEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH VLLICMIYKKQEN HHHHHHHHHHCCC >Mature Secondary Structure MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLP CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH IVLSIVASQLFFIERDNDVLKNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGG HHHHHHHHHHHHEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRSYIFSIILSFVYAIFNFSISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE NIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA EEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH VLLICMIYKKQEN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA