Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698404

Identifier: 126698404

GI number: 126698404

Start: 999148

End: 999930

Strand: Direct

Name: 126698404

Synonym: CD0824

Alternate gene names: NA

Gene position: 999148-999930 (Clockwise)

Preceding gene: 126698403

Following gene: 126698405

Centisome position: 23.29

GC content: 33.59

Gene sequence:

>783_bases
ATGCTTGATATAATTACTACAGAATTTCAAAAAATAAAAAGATATAATATTCTATGGATTGGTGTTGTTGCTGTTCTGTT
TTCAGCACTATTGGCAGTTTTTCAGGTTGTAAGTTCACACGGCAGTGACCCTCTAACGTATGAGAGCTTTGCAAACGGAG
TTATCTGGAATAATTTCAGTCTTAGTTTTCCATTTGGGATTACACTTATTGGAGGATATCTTATTAACCGTGAATATACA
GACCAAACCTTAAAAAACATCCTAACTGTTCCTATTTCATTACGCAAATTGCTAGTGGGAAAATTAATTGCGGTTGGAGG
AATTACTGTATTGTTAAGTCTTTTCAGCTTCTTATGCACATTTATTTTGGGGTTGTTATTTTGCAATATCAATATATCTG
TTACACTCGTTGTAAAATCCTTAGTTCAGATTTTGTCTGTTAATCTGTATTGTTATGTTGCTGTTTTGCCGATTATTGCT
TATTTTGGTCGTAAACAAAATGCATTTCTGACGGGTGTAGGGATTGCATTTGTATACGGTTTTTGTGGTGTGTTTGTTGC
TGGAAGAAATCTGACAGACTTTTATCCAATCACAGCAGGTCTTGGTCTAGTTGGATACAACAATGGTGCTGGTACTGTTT
ATCAGCCACTTATCGGTGCTATGACTTTGATTGTAATTCTAATCTTGACAACTATTCTACTTGTATTTACACCTAATTAT
GATAAAGTTATGACCATATCTAAGAAAAAAGGGATAAAGCATAAAAAGTATTCTCATAAATAA

Upstream 100 bases:

>100_bases
CTCAACTCCTGCTTGTGTAGGTATTTTATGTTTGATAACCATTATAGCAGTCCTGCTGATTTGTATGATATACAAAAAGC
AGGAGAATTAGGAGGTATCT

Downstream 100 bases:

>100_bases
CATAAATATTGTTTCTATTATTTAAGTTGCTAGACAGTGAAAAGAAAAAATCTGTCGTACAGTGGCTATATGCTCATGTA
TTCAAGAAGCTACAGTTTTG

Product: lantibiotic ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLDIITTEFQKIKRYNILWIGVVAVLFSALLAVFQVVSSHGSDPLTYESFANGVIWNNFSLSFPFGITLIGGYLINREYT
DQTLKNILTVPISLRKLLVGKLIAVGGITVLLSLFSFLCTFILGLLFCNINISVTLVVKSLVQILSVNLYCYVAVLPIIA
YFGRKQNAFLTGVGIAFVYGFCGVFVAGRNLTDFYPITAGLGLVGYNNGAGTVYQPLIGAMTLIVILILTTILLVFTPNY
DKVMTISKKKGIKHKKYSHK

Sequences:

>Translated_260_residues
MLDIITTEFQKIKRYNILWIGVVAVLFSALLAVFQVVSSHGSDPLTYESFANGVIWNNFSLSFPFGITLIGGYLINREYT
DQTLKNILTVPISLRKLLVGKLIAVGGITVLLSLFSFLCTFILGLLFCNINISVTLVVKSLVQILSVNLYCYVAVLPIIA
YFGRKQNAFLTGVGIAFVYGFCGVFVAGRNLTDFYPITAGLGLVGYNNGAGTVYQPLIGAMTLIVILILTTILLVFTPNY
DKVMTISKKKGIKHKKYSHK
>Mature_260_residues
MLDIITTEFQKIKRYNILWIGVVAVLFSALLAVFQVVSSHGSDPLTYESFANGVIWNNFSLSFPFGITLIGGYLINREYT
DQTLKNILTVPISLRKLLVGKLIAVGGITVLLSLFSFLCTFILGLLFCNINISVTLVVKSLVQILSVNLYCYVAVLPIIA
YFGRKQNAFLTGVGIAFVYGFCGVFVAGRNLTDFYPITAGLGLVGYNNGAGTVYQPLIGAMTLIVILILTTILLVFTPNY
DKVMTISKKKGIKHKKYSHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28587; Mature: 28587

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIITTEFQKIKRYNILWIGVVAVLFSALLAVFQVVSSHGSDPLTYESFANGVIWNNFS
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCE
LSFPFGITLIGGYLINREYTDQTLKNILTVPISLRKLLVGKLIAVGGITVLLSLFSFLCT
EECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FILGLLFCNINISVTLVVKSLVQILSVNLYCYVAVLPIIAYFGRKQNAFLTGVGIAFVYG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FCGVFVAGRNLTDFYPITAGLGLVGYNNGAGTVYQPLIGAMTLIVILILTTILLVFTPNY
HHHHHHCCCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKVMTISKKKGIKHKKYSHK
CCEEEEHHHCCCCCCCCCCC
>Mature Secondary Structure
MLDIITTEFQKIKRYNILWIGVVAVLFSALLAVFQVVSSHGSDPLTYESFANGVIWNNFS
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCE
LSFPFGITLIGGYLINREYTDQTLKNILTVPISLRKLLVGKLIAVGGITVLLSLFSFLCT
EECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FILGLLFCNINISVTLVVKSLVQILSVNLYCYVAVLPIIAYFGRKQNAFLTGVGIAFVYG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FCGVFVAGRNLTDFYPITAGLGLVGYNNGAGTVYQPLIGAMTLIVILILTTILLVFTPNY
HHHHHHCCCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKVMTISKKKGIKHKKYSHK
CCEEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA