| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is bglC [H]
Identifier: 126698398
GI number: 126698398
Start: 992746
End: 994152
Strand: Direct
Name: bglC [H]
Synonym: CD0818
Alternate gene names: 126698398
Gene position: 992746-994152 (Clockwise)
Preceding gene: 126698397
Following gene: 126698399
Centisome position: 23.14
GC content: 31.41
Gene sequence:
>1407_bases ATGAATACAGGATTTCCAAAAGACTTTTTATGGGGAGCATCATCTTCTGCATTTCAAGTGGAAGGAGCTTGGGATAAAGA CAATAAAGGAAAAACCGTAGCCGACTATAATTCTTTTAAAAAATCTCATTTACAGGCAGATACTAAAGTCGCATCAGACT TTTACCATAATTATGAAGAAGATATTGAATTAATGAAAGAATTAGGGATGAAAACATATCGTTTTTCAATTTCATGGGCA AGAATAATACCAGATGGTGAAGGAGAGATAAACCAGAAAGGTTTAGACTTTTATAATAAGATAATAGACAAACTAATAGA GTGTGATATTGAGCCATTCGTAACTTTATACCATTTTGACCTTCCATTTAAATTAGTAGAGAAATATAATGGTTGGGAAA GTAGAGAAACTGTCTATGCTTTTGAAAGATTTGCTAAAATATGCTTTAAGCATTTTGGAGATAGGGTAAAGTATTGGCAA CCTCATAATGAACAGAATTTAATTGTTAGAGTGGAGGAGAGAATTAATATATATGATGAAACAGATTCATGGAAGATAGA TAAAATACGTGCTCAGATGGATTATAATCTTTGCTTAGCACATGCATTAGCAGTCAATGCATGTCATGAGATGATAAAAG AAAGTAAAATTGGAGCAGCAGTATCATCATCTGTAACATATCCTCTTACTTCTAAGCCAGAAGATGTATATGCAGCTAGA ATGAATGATAATTTTAAAGTGTACTATATGCTTGATATGCATCATTATGGAGAATATCCAGGGTATTATATGAAGTATCT TGAAAAAAGAAATATAGTTCCTCACATGGAAGATGGGGATAAAGAGATACTTAAAAAAGCTAAAATGGATTTTATAGCTG TAAATTATTATAGGACAAATTGTGCAGAAGCTTTACCTGAAGATTCACAACATCCATTTGGATTAAGAGAAGGAACTGTT GATTTTAGTATGTATGGACTATTTAAAATGTCAATGAATCCTAACTTAGAGGCTTCTGAGTATGGAGCAGCAATAGACCC ATCAGGTCTTAGAGTTGCCTTAAATGAATATTGGCAAAGATATCACTTACCTGTTATAATAACAGAAAATGGTCTAGGAG CTAAAGATATATTAGAAGATGGAAAAATTCATGATGACTATCGTATAGACTATTTAAGAAGTCATATAAATGCATGTAAA CTAGCTATTGAAGATGGTGTAGAGATGATTGGATATTGTCCATGGTCATTTACAGACCTTTTAAGTTCTTCTCAAGGTTT TAATAAGCGTTATGGACTTGTTTATATAAATAGAACTGACCATGAAGTTTTAGATTTAAAAAGAATCAAGAAAGATAGTT TTTACTGGTATAAAGAAGTTATAGAGAACAATGGAATAGTAAAATAA
Upstream 100 bases:
>100_bases ATCTATCTCAATGAAATAACAAAGAAAAGAGTTAATATAGAGTGAACTTATTGCAATGAATCAACAAAGAAAATAATCAA TATAAAAAGGAGAAATATTT
Downstream 100 bases:
>100_bases ACATAAATATATATTGAGGGTTTTAGTATGTACATTACAAAGGTATTAAATAATTCGTTGCTACTTGCAAAGGATGATAA TGATGAAGAAATAATATTGA
Product: 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: 6-phospho-beta-glucosidase [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNTGFPKDFLWGASSSAFQVEGAWDKDNKGKTVADYNSFKKSHLQADTKVASDFYHNYEEDIELMKELGMKTYRFSISWA RIIPDGEGEINQKGLDFYNKIIDKLIECDIEPFVTLYHFDLPFKLVEKYNGWESRETVYAFERFAKICFKHFGDRVKYWQ PHNEQNLIVRVEERINIYDETDSWKIDKIRAQMDYNLCLAHALAVNACHEMIKESKIGAAVSSSVTYPLTSKPEDVYAAR MNDNFKVYYMLDMHHYGEYPGYYMKYLEKRNIVPHMEDGDKEILKKAKMDFIAVNYYRTNCAEALPEDSQHPFGLREGTV DFSMYGLFKMSMNPNLEASEYGAAIDPSGLRVALNEYWQRYHLPVIITENGLGAKDILEDGKIHDDYRIDYLRSHINACK LAIEDGVEMIGYCPWSFTDLLSSSQGFNKRYGLVYINRTDHEVLDLKRIKKDSFYWYKEVIENNGIVK
Sequences:
>Translated_468_residues MNTGFPKDFLWGASSSAFQVEGAWDKDNKGKTVADYNSFKKSHLQADTKVASDFYHNYEEDIELMKELGMKTYRFSISWA RIIPDGEGEINQKGLDFYNKIIDKLIECDIEPFVTLYHFDLPFKLVEKYNGWESRETVYAFERFAKICFKHFGDRVKYWQ PHNEQNLIVRVEERINIYDETDSWKIDKIRAQMDYNLCLAHALAVNACHEMIKESKIGAAVSSSVTYPLTSKPEDVYAAR MNDNFKVYYMLDMHHYGEYPGYYMKYLEKRNIVPHMEDGDKEILKKAKMDFIAVNYYRTNCAEALPEDSQHPFGLREGTV DFSMYGLFKMSMNPNLEASEYGAAIDPSGLRVALNEYWQRYHLPVIITENGLGAKDILEDGKIHDDYRIDYLRSHINACK LAIEDGVEMIGYCPWSFTDLLSSSQGFNKRYGLVYINRTDHEVLDLKRIKKDSFYWYKEVIENNGIVK >Mature_468_residues MNTGFPKDFLWGASSSAFQVEGAWDKDNKGKTVADYNSFKKSHLQADTKVASDFYHNYEEDIELMKELGMKTYRFSISWA RIIPDGEGEINQKGLDFYNKIIDKLIECDIEPFVTLYHFDLPFKLVEKYNGWESRETVYAFERFAKICFKHFGDRVKYWQ PHNEQNLIVRVEERINIYDETDSWKIDKIRAQMDYNLCLAHALAVNACHEMIKESKIGAAVSSSVTYPLTSKPEDVYAAR MNDNFKVYYMLDMHHYGEYPGYYMKYLEKRNIVPHMEDGDKEILKKAKMDFIAVNYYRTNCAEALPEDSQHPFGLREGTV DFSMYGLFKMSMNPNLEASEYGAAIDPSGLRVALNEYWQRYHLPVIITENGLGAKDILEDGKIHDDYRIDYLRSHINACK LAIEDGVEMIGYCPWSFTDLLSSSQGFNKRYGLVYINRTDHEVLDLKRIKKDSFYWYKEVIENNGIVK
Specific function: Is able to catalyze the hydrolysis of aryl-phospho-beta- D-glucosides such as 4-methylumbelliferyl-phospho-beta-D- glucopyranoside (MUG-P), phosphoarbutin and phosphosalicin. Is not essential for growth on arbutin and salicin as the sole carbon source [H]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=482, Percent_Identity=31.1203319502075, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI110681710, Length=484, Percent_Identity=30.1652892561983, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI13273313, Length=485, Percent_Identity=31.340206185567, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI28376633, Length=485, Percent_Identity=27.4226804123711, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI24497614, Length=493, Percent_Identity=28.3975659229209, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI190360571, Length=97, Percent_Identity=42.2680412371134, Blast_Score=83, Evalue=5e-16, Organism=Escherichia coli, GI2367270, Length=478, Percent_Identity=38.9121338912134, Blast_Score=339, Evalue=3e-94, Organism=Escherichia coli, GI1789070, Length=482, Percent_Identity=37.551867219917, Blast_Score=325, Evalue=3e-90, Organism=Escherichia coli, GI2367174, Length=484, Percent_Identity=37.8099173553719, Blast_Score=322, Evalue=3e-89, Organism=Caenorhabditis elegans, GI17552856, Length=494, Percent_Identity=32.7935222672065, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17539390, Length=482, Percent_Identity=29.045643153527, Blast_Score=191, Evalue=5e-49, Organism=Drosophila melanogaster, GI21356577, Length=473, Percent_Identity=27.4841437632135, Blast_Score=185, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 54656; Mature: 54656
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTGFPKDFLWGASSSAFQVEGAWDKDNKGKTVADYNSFKKSHLQADTKVASDFYHNYEE CCCCCCCHHHCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHH DIELMKELGMKTYRFSISWARIIPDGEGEINQKGLDFYNKIIDKLIECDIEPFVTLYHFD HHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC LPFKLVEKYNGWESRETVYAFERFAKICFKHFGDRVKYWQPHNEQNLIVRVEERINIYDE CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEC TDSWKIDKIRAQMDYNLCLAHALAVNACHEMIKESKIGAAVSSSVTYPLTSKPEDVYAAR CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCCCCCEEEEE MNDNFKVYYMLDMHHYGEYPGYYMKYLEKRNIVPHMEDGDKEILKKAKMDFIAVNYYRTN ECCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEHHH CAEALPEDSQHPFGLREGTVDFSMYGLFKMSMNPNLEASEYGAAIDPSGLRVALNEYWQR HHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCEECCCCCEEHHHHHHHH YHLPVIITENGLGAKDILEDGKIHDDYRIDYLRSHINACKLAIEDGVEMIGYCPWSFTDL HCCCEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH LSSSQGFNKRYGLVYINRTDHEVLDLKRIKKDSFYWYKEVIENNGIVK HCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MNTGFPKDFLWGASSSAFQVEGAWDKDNKGKTVADYNSFKKSHLQADTKVASDFYHNYEE CCCCCCCHHHCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHH DIELMKELGMKTYRFSISWARIIPDGEGEINQKGLDFYNKIIDKLIECDIEPFVTLYHFD HHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC LPFKLVEKYNGWESRETVYAFERFAKICFKHFGDRVKYWQPHNEQNLIVRVEERINIYDE CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEC TDSWKIDKIRAQMDYNLCLAHALAVNACHEMIKESKIGAAVSSSVTYPLTSKPEDVYAAR CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCCCCCEEEEE MNDNFKVYYMLDMHHYGEYPGYYMKYLEKRNIVPHMEDGDKEILKKAKMDFIAVNYYRTN ECCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEHHH CAEALPEDSQHPFGLREGTVDFSMYGLFKMSMNPNLEASEYGAAIDPSGLRVALNEYWQR HHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCEECCCCCEEHHHHHHHH YHLPVIITENGLGAKDILEDGKIHDDYRIDYLRSHINACKLAIEDGVEMIGYCPWSFTDL HCCCEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH LSSSQGFNKRYGLVYINRTDHEVLDLKRIKKDSFYWYKEVIENNGIVK HCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704255; 8969502; 9384377; 2841296 [H]