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The map label for this gene is tlpB [C]

Identifier: 126698397

GI number: 126698397

Start: 991118

End: 992236

Strand: Direct

Name: tlpB [C]

Synonym: CD0817

Alternate gene names: 126698397

Gene position: 991118-992236 (Clockwise)

Preceding gene: 126698396

Following gene: 126698398

Centisome position: 23.1

GC content: 26.54

Gene sequence:

>1119_bases
GTGATAGCAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAACAAGAGTTAATTAACAAAACTTTTGG
ATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGATGTTTATAAAAACGATAAAGAAACTTTTACTTATA
AACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAAATGGCTTAAAGAACCTGACAAATTTTCACTACAAAAC
GCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGCAGGACTTCCTAAATTTAAATCAAAGAAAAT
TAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAACTTG
GTATGGTTAAGATAAGGGATAAACAAGTACCTCAAGGTAGAATACTTAATGCCACTATATCTAAAGAACCAAGTGGTAGA
TATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGTATTTGAAAATACTAATAATCAGATAGGTTTAGATTTAGG
AATTAAAGAATTTTGTATCTCAAGTTGTGGAGAGTTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAGCTTG
CTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAGGACTT
CAAGAACATATAGCTAATCAAAGAAAGGATTTTTTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTG
CATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTCGCTTAATTTCTGATGTGTCATGGTCAGAGT
TTATTCGTCAATTAGAATACAAGGCTAATTGGCATGGTAGACAAATTGTAAAGGTGGGTAAATTCTTTGCAAGTTCACAA
ATATGCAATAAATGTGGGTATAAAAACGAGGAAGTTAAGGATTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGA
AACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGACTAATAACAATTCAAAATAAATAA

Upstream 100 bases:

>100_bases
ATTATGATAGGTGATTAATAAATTGTTCACCACAGCATTATATAATATATTAAATATGATAAAATTATTAAAAAGTGTAT
CAAAAAACAATTAAAGTGAG

Downstream 100 bases:

>100_bases
CTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAAGACATATTTTAGTATGCAAAATTCTATGA
AGCAGGAACCCTGTGACTTT

Product: transposase-like protein B

Products: NA

Alternate protein names: ORF401 [H]

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN
ALKDLDNAYKKFFKEKAGLPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
QEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQ
ICNKCGYKNEEVKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK

Sequences:

>Translated_372_residues
MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN
ALKDLDNAYKKFFKEKAGLPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
QEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQ
ICNKCGYKNEEVKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK
>Mature_372_residues
MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN
ALKDLDNAYKKFFKEKAGLPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
QEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQ
ICNKCGYKNEEVKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=363, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=8e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 43538; Mature: 43538

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDL
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TNLKKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKAGLPKFKSKKINRFSYKTNFTNGN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHEEEEEECCCCC
IMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNN
EEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCEEEEEECCCC
QIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
EEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
QEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KANWHGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHDRDINASINIL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH
KEGLRLITIQNK
HCCCEEEEEECC
>Mature Secondary Structure
MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDL
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TNLKKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKAGLPKFKSKKINRFSYKTNFTNGN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHEEEEEECCCCC
IMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNN
EEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCEEEEEECCCC
QIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
EEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
QEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KANWHGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHDRDINASINIL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH
KEGLRLITIQNK
HCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7665509 [H]