| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is act [H]
Identifier: 126698379
GI number: 126698379
Start: 970487
End: 971680
Strand: Direct
Name: act [H]
Synonym: CD0799
Alternate gene names: 126698379
Gene position: 970487-971680 (Clockwise)
Preceding gene: 126698378
Following gene: 126698380
Centisome position: 22.62
GC content: 34.09
Gene sequence:
>1194_bases ATGAAAAAAGGAGCATTAAGCAATATAAAGGTACTTGACCTTACAAGAGTTCTTGCAGGTCCATATTGTACAATGATGTT GGCGGATTTTGGAGCTGATGTTATAAAAATAGAGATGCCAAGAAAAGGTGATGATACAAGAGGTTTTGGACCTTTTGTAA ATGGAGAGAGTTTATACTATGCAAATATAAATAGAAATAAAAAAGGTATCACTCTAAACCTTAAATCAGAAGAAGGAAAA AATATATTTTTAGAAATGGTAAAACATGCTGATGTTGTAGTAGAAAATTACAGACCAGGTGTAATGGAAAAGTTAGGTCT GGGTTATGATGAGTTGGCTAAAGTTAACAATCAAATAATTTATGGAGCTGTATCAGGATTTGGATGTTATGGACCATATT CAGAACGTCCAGGTTATGATATTATTGCACAGGCAATGGGTGGTCTTATGAGTATAACAGGGCAAGAAGGAGGAGAACCA ACGAGAGTTGGTAATGCTATGGGTGATGTACTAGGTGGAATGAATTTAACCATTGGTATACTCACAGCACTCAACGCTAG AAAAATAATAGGAAAAGGACAAAGAGTAGATGTTTCCCTCGTTGATTCTGTTGTATCGTCTCTCGAAACTGGTATACAGA GATACTTTGATTCAGGACAACCTGAACTTATGGGTAATAGATATGCTTCAGCCTATCCTTATGACTCTTTTAAGGCAAGT GATGGAAGTTTTGTAATAGGCTGTGGTAATGACAAACTTTTTGAAAAGTTATGTAAAAAAGTTCTTTTTAGAGAAGACCT TTTAATAGATGAGAGATTTAAAACAAATCTTAATCGTTGTGAACATTACAAGGCTCTTAAACCAGAAATAGAAAAATGGT CTGTTAAGCATACAATAAAAGAAGCAGTTGACTTAATATCAGAGGCTGGAGTTCCTGCTGCTCCTATCTATAATCTTGAT TGTGTTACAACAGATGAACATATAGCAAAAGCAAGAGAAATGATTGTAGATATTAGTCATCCTATTATAGGAAATATGAA AGTCAATGGAAATCCAGTTAAGTTGATGACAACAAAAGCTAAAATTGATATGCCAGCACCATCTCTAGGGGAAAGTAACG AGGAGATTTATAATGGTTGGCTTGGTTTTGATAGTGATAAAATAAAAGATTTAAAAGAAAATGGAGTTATTTGA
Upstream 100 bases:
>100_bases TGCAATAACACATTTAATGAACTAATTAGAATAACTGAAAATAAATCATTAAATTTAACTTTTAATATTAATCAATATAA TATAATTTGGAGGGAAAGTT
Downstream 100 bases:
>100_bases TTAAAAGATAGCTAAACACACTTGTGACTTTAGTCATGGGAGGTTCAGTTAGAATAATATCAAAAAATATTAAATCAATA CTGTAAATCAAATATAGAAT
Product: beta-alanine CoA-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKKGALSNIKVLDLTRVLAGPYCTMMLADFGADVIKIEMPRKGDDTRGFGPFVNGESLYYANINRNKKGITLNLKSEEGK NIFLEMVKHADVVVENYRPGVMEKLGLGYDELAKVNNQIIYGAVSGFGCYGPYSERPGYDIIAQAMGGLMSITGQEGGEP TRVGNAMGDVLGGMNLTIGILTALNARKIIGKGQRVDVSLVDSVVSSLETGIQRYFDSGQPELMGNRYASAYPYDSFKAS DGSFVIGCGNDKLFEKLCKKVLFREDLLIDERFKTNLNRCEHYKALKPEIEKWSVKHTIKEAVDLISEAGVPAAPIYNLD CVTTDEHIAKAREMIVDISHPIIGNMKVNGNPVKLMTTKAKIDMPAPSLGESNEEIYNGWLGFDSDKIKDLKENGVI
Sequences:
>Translated_397_residues MKKGALSNIKVLDLTRVLAGPYCTMMLADFGADVIKIEMPRKGDDTRGFGPFVNGESLYYANINRNKKGITLNLKSEEGK NIFLEMVKHADVVVENYRPGVMEKLGLGYDELAKVNNQIIYGAVSGFGCYGPYSERPGYDIIAQAMGGLMSITGQEGGEP TRVGNAMGDVLGGMNLTIGILTALNARKIIGKGQRVDVSLVDSVVSSLETGIQRYFDSGQPELMGNRYASAYPYDSFKAS DGSFVIGCGNDKLFEKLCKKVLFREDLLIDERFKTNLNRCEHYKALKPEIEKWSVKHTIKEAVDLISEAGVPAAPIYNLD CVTTDEHIAKAREMIVDISHPIIGNMKVNGNPVKLMTTKAKIDMPAPSLGESNEEIYNGWLGFDSDKIKDLKENGVI >Mature_397_residues MKKGALSNIKVLDLTRVLAGPYCTMMLADFGADVIKIEMPRKGDDTRGFGPFVNGESLYYANINRNKKGITLNLKSEEGK NIFLEMVKHADVVVENYRPGVMEKLGLGYDELAKVNNQIIYGAVSGFGCYGPYSERPGYDIIAQAMGGLMSITGQEGGEP TRVGNAMGDVLGGMNLTIGILTALNARKIIGKGQRVDVSLVDSVVSSLETGIQRYFDSGQPELMGNRYASAYPYDSFKAS DGSFVIGCGNDKLFEKLCKKVLFREDLLIDERFKTNLNRCEHYKALKPEIEKWSVKHTIKEAVDLISEAGVPAAPIYNLD CVTTDEHIAKAREMIVDISHPIIGNMKVNGNPVKLMTTKAKIDMPAPSLGESNEEIYNGWLGFDSDKIKDLKENGVI
Specific function: Unknown
COG id: COG1804
COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]
Homologues:
Organism=Homo sapiens, GI300863128, Length=395, Percent_Identity=38.2278481012658, Blast_Score=261, Evalue=7e-70, Organism=Homo sapiens, GI300863124, Length=420, Percent_Identity=36.6666666666667, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI300863126, Length=393, Percent_Identity=34.0966921119593, Blast_Score=221, Evalue=6e-58, Organism=Homo sapiens, GI13376042, Length=420, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI42794625, Length=401, Percent_Identity=27.1820448877805, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI266456254, Length=401, Percent_Identity=27.1820448877805, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI266458393, Length=259, Percent_Identity=32.046332046332, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI266458397, Length=259, Percent_Identity=32.046332046332, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI42822893, Length=144, Percent_Identity=35.4166666666667, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI266458395, Length=144, Percent_Identity=35.4166666666667, Blast_Score=98, Evalue=1e-20, Organism=Escherichia coli, GI87082093, Length=378, Percent_Identity=39.6825396825397, Blast_Score=284, Evalue=6e-78, Organism=Escherichia coli, GI1788717, Length=416, Percent_Identity=31.25, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1786222, Length=346, Percent_Identity=24.2774566473988, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32564160, Length=262, Percent_Identity=32.4427480916031, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI115535051, Length=274, Percent_Identity=30.2919708029197, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24648431, Length=400, Percent_Identity=37.75, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24585488, Length=266, Percent_Identity=30.4511278195489, Blast_Score=122, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003673 [H]
Pfam domain/function: PF02515 CoA_transf_3 [H]
EC number: NA
Molecular weight: Translated: 43574; Mature: 43574
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGALSNIKVLDLTRVLAGPYCTMMLADFGADVIKIEMPRKGDDTRGFGPFVNGESLYY CCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE ANINRNKKGITLNLKSEEGKNIFLEMVKHADVVVENYRPGVMEKLGLGYDELAKVNNQII EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCCHHHHHCCCHHHHHHHCCEEE YGAVSGFGCYGPYSERPGYDIIAQAMGGLMSITGQEGGEPTRVGNAMGDVLGGMNLTIGI EEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH LTALNARKIIGKGQRVDVSLVDSVVSSLETGIQRYFDSGQPELMGNRYASAYPYDSFKAS HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DGSFVIGCGNDKLFEKLCKKVLFREDLLIDERFKTNLNRCEHYKALKPEIEKWSVKHTIK CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EAVDLISEAGVPAAPIYNLDCVTTDEHIAKAREMIVDISHPIIGNMKVNGNPVKLMTTKA HHHHHHHHCCCCCCCEECCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEE KIDMPAPSLGESNEEIYNGWLGFDSDKIKDLKENGVI EECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKKGALSNIKVLDLTRVLAGPYCTMMLADFGADVIKIEMPRKGDDTRGFGPFVNGESLYY CCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE ANINRNKKGITLNLKSEEGKNIFLEMVKHADVVVENYRPGVMEKLGLGYDELAKVNNQII EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCCHHHHHCCCHHHHHHHCCEEE YGAVSGFGCYGPYSERPGYDIIAQAMGGLMSITGQEGGEPTRVGNAMGDVLGGMNLTIGI EEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH LTALNARKIIGKGQRVDVSLVDSVVSSLETGIQRYFDSGQPELMGNRYASAYPYDSFKAS HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DGSFVIGCGNDKLFEKLCKKVLFREDLLIDERFKTNLNRCEHYKALKPEIEKWSVKHTIK CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EAVDLISEAGVPAAPIYNLDCVTTDEHIAKAREMIVDISHPIIGNMKVNGNPVKLMTTKA HHHHHHHHCCCCCCCEECCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEE KIDMPAPSLGESNEEIYNGWLGFDSDKIKDLKENGVI EECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 8125343 [H]