| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is spoVAE [H]
Identifier: 126698355
GI number: 126698355
Start: 945994
End: 946356
Strand: Direct
Name: spoVAE [H]
Synonym: CD0775
Alternate gene names: 126698355
Gene position: 945994-946356 (Clockwise)
Preceding gene: 126698354
Following gene: 126698356
Centisome position: 22.05
GC content: 32.78
Gene sequence:
>363_bases ATGTTAATGGACTATGTAAGAGTATTTATTGTAGGTGGAATTATATGTTTAATAGCCCAAGTAATGATGGATTATTTCAA AATGCAAACTCCATATGTTATGGTAACGTATGTAACAACTGGTGTAGTTTTAACTTTTCTAGGACTTTATGAGCCATTAG TTAAGTTTGCAGCAGCAGGTGCAACAGTTCCTATAATAGGATTTGGATATTCACTTGCTACAGGAGTAATAAAATCAATT CAAAGTGATGGTTTTTTAGGTATTTTTTTAGGAGGTACAACTGCTACAGCTGGTGGAATAGCAGCAGCTATATTCTTTGG ATATATTATGTCAGTAGTATTTACTCCAAAAGCAAAACCATAA
Upstream 100 bases:
>100_bases ACAGGAGCACTACTTTCACCGACAAGTACACTACAAAAGCAGACAATACCATGTGTTGCACATGCAGTAGTAATAGTAAA TGAGTAGGAAGTGATATAAT
Downstream 100 bases:
>100_bases ATCTTTATTAAAAGAATAATAAGTTTTTGAAATAATAACTTTTTATAAAGCAGGTGGATATCTTTTAGATTCCACCTGTT TTTTATATAAAGAAGCGTTT
Product: stage V sporulation protein AE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATGVIKSI QSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP
Sequences:
>Translated_120_residues MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATGVIKSI QSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP >Mature_120_residues MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATGVIKSI QSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014204 - InterPro: IPR005562 [H]
Pfam domain/function: PF03862 SpoVA [H]
EC number: NA
Molecular weight: Translated: 12729; Mature: 12729
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATVPIIGFGYSLATGVIKSIQSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP CCCCCEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATVPIIGFGYSLATGVIKSIQSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP CCCCCEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]