Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is spoVAD [H]

Identifier: 126698354

GI number: 126698354

Start: 944967

End: 945980

Strand: Direct

Name: spoVAD [H]

Synonym: CD0774

Alternate gene names: 126698354

Gene position: 944967-945980 (Clockwise)

Preceding gene: 126698353

Following gene: 126698355

Centisome position: 22.03

GC content: 35.8

Gene sequence:

>1014_bases
ATGAAAAATAAAAGAATTGGAAAAAGAACAGTCAAGTTAGAAAATAAACCAACCATAATATCAACTGGAACTATAGTAGG
TCCTAAGGAAGGTGAAGGACCACTAAAGGACTATTTTGATATGATTATGACTGACGATTTATATGGTGAAAAGACTTGGG
AATTAGCTGAAAGTAAAATGGTAGAGACTGCATCTCAACAAGCTATCCAAAAGGCAGGTAAAAAATTGTCAGATGTAAAT
TATATGCTAGGTGGCGATTTAATAAATCAAATAGTTCCAGCATCCTTTGCAGCAAGAGAACTGGCTATTCCATTTTTAGG
TATATATGGAGCTTGTTCTACAATGGCAGAAGGTCTTTGTATAGGTTCTATGCTTATAGATGGTGGTTTTGCTGATTTAG
TACTGTCAGGTACATCAAGTCACTATTGTACAGCAGAAAGACAATTTAGATTCCCACTTGAACTTGGAAATCAAAAACCA
ATGACAGCCCAGTGGACAGTTACAGGAGCAGGAAGTGTATTATTAGCTCCTAATGGAGACGGTCCAAAAGTAAAGTATGT
TACTGTTGGTAAAGTAATAGATGAGGGTATTGATGATGGTAATAATATGGGACCAGCTATGGCTCCAGCAGCAATAGATA
CTATCTACTCTTACTTTGAAGATACTAATGATGACCCAAATAGCTTTGATATAATTGCTACTGGAGATTTAGGTACTCTT
GGAAAACAGATAGCAGAAGACTTTCTAAAAGAAAAAGGTGTAGATATATCAAAAGTTTATACTGACTGTGGTATAGAGAT
GTTTAACCTTAAAGAACAAGATGTCCACTGTGGTGGAAGTGGATGTGGGTGTTCAGCTACAGTGTTTGCAGGATATATAT
ATGATAAGTTGAGAAAAAAAGAATTTAACAAAGTAATGCTTGTATCAACAGGAGCACTACTTTCACCGACAAGTACACTA
CAAAAGCAGACAATACCATGTGTTGCACATGCAGTAGTAATAGTAAATGAGTAG

Upstream 100 bases:

>100_bases
AAGTAACTAATTGAAAAATAATTCTGCAGATTTAATTAATATTTTTAATTAATATTAAAAATTTGAATAGTAAAATGCAA
AATTAAAAAGGTGTGAAAAT

Downstream 100 bases:

>100_bases
GAAGTGATATAATATGTTAATGGACTATGTAAGAGTATTTATTGTAGGTGGAATTATATGTTTAATAGCCCAAGTAATGA
TGGATTATTTCAAAATGCAA

Product: stage V sporulation protein AD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQKAGKKLSDVN
YMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKP
MTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL
GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTL
QKQTIPCVAHAVVIVNE

Sequences:

>Translated_337_residues
MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQKAGKKLSDVN
YMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKP
MTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL
GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTL
QKQTIPCVAHAVVIVNE
>Mature_337_residues
MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQKAGKKLSDVN
YMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKP
MTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL
GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTL
QKQTIPCVAHAVVIVNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010894
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF07451 SpoVAD [H]

EC number: NA

Molecular weight: Translated: 36207; Mature: 36207

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKM
CCCCCCCCEEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
VETASQQAIQKAGKKLSDVNYMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLC
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKPMTAQWTVTGAGSVLLAPNGD
EEHHHHCCCCEEEEEECCCCCEEECCCCEECHHHCCCCCCCEEEEEEECCCEEEEECCCC
GPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL
CCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH
GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKK
HHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EFNKVMLVSTGALLSPTSTLQKQTIPCVAHAVVIVNE
HCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEEC
>Mature Secondary Structure
MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKM
CCCCCCCCEEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
VETASQQAIQKAGKKLSDVNYMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLC
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKPMTAQWTVTGAGSVLLAPNGD
EEHHHHCCCCEEEEEECCCCCEEECCCCEECHHHCCCCCCCEEEEEEECCCEEEEECCCC
GPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL
CCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH
GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKK
HHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EFNKVMLVSTGALLSPTSTLQKQTIPCVAHAVVIVNE
HCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]