| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is spoVAD [H]
Identifier: 126698354
GI number: 126698354
Start: 944967
End: 945980
Strand: Direct
Name: spoVAD [H]
Synonym: CD0774
Alternate gene names: 126698354
Gene position: 944967-945980 (Clockwise)
Preceding gene: 126698353
Following gene: 126698355
Centisome position: 22.03
GC content: 35.8
Gene sequence:
>1014_bases ATGAAAAATAAAAGAATTGGAAAAAGAACAGTCAAGTTAGAAAATAAACCAACCATAATATCAACTGGAACTATAGTAGG TCCTAAGGAAGGTGAAGGACCACTAAAGGACTATTTTGATATGATTATGACTGACGATTTATATGGTGAAAAGACTTGGG AATTAGCTGAAAGTAAAATGGTAGAGACTGCATCTCAACAAGCTATCCAAAAGGCAGGTAAAAAATTGTCAGATGTAAAT TATATGCTAGGTGGCGATTTAATAAATCAAATAGTTCCAGCATCCTTTGCAGCAAGAGAACTGGCTATTCCATTTTTAGG TATATATGGAGCTTGTTCTACAATGGCAGAAGGTCTTTGTATAGGTTCTATGCTTATAGATGGTGGTTTTGCTGATTTAG TACTGTCAGGTACATCAAGTCACTATTGTACAGCAGAAAGACAATTTAGATTCCCACTTGAACTTGGAAATCAAAAACCA ATGACAGCCCAGTGGACAGTTACAGGAGCAGGAAGTGTATTATTAGCTCCTAATGGAGACGGTCCAAAAGTAAAGTATGT TACTGTTGGTAAAGTAATAGATGAGGGTATTGATGATGGTAATAATATGGGACCAGCTATGGCTCCAGCAGCAATAGATA CTATCTACTCTTACTTTGAAGATACTAATGATGACCCAAATAGCTTTGATATAATTGCTACTGGAGATTTAGGTACTCTT GGAAAACAGATAGCAGAAGACTTTCTAAAAGAAAAAGGTGTAGATATATCAAAAGTTTATACTGACTGTGGTATAGAGAT GTTTAACCTTAAAGAACAAGATGTCCACTGTGGTGGAAGTGGATGTGGGTGTTCAGCTACAGTGTTTGCAGGATATATAT ATGATAAGTTGAGAAAAAAAGAATTTAACAAAGTAATGCTTGTATCAACAGGAGCACTACTTTCACCGACAAGTACACTA CAAAAGCAGACAATACCATGTGTTGCACATGCAGTAGTAATAGTAAATGAGTAG
Upstream 100 bases:
>100_bases AAGTAACTAATTGAAAAATAATTCTGCAGATTTAATTAATATTTTTAATTAATATTAAAAATTTGAATAGTAAAATGCAA AATTAAAAAGGTGTGAAAAT
Downstream 100 bases:
>100_bases GAAGTGATATAATATGTTAATGGACTATGTAAGAGTATTTATTGTAGGTGGAATTATATGTTTAATAGCCCAAGTAATGA TGGATTATTTCAAAATGCAA
Product: stage V sporulation protein AD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQKAGKKLSDVN YMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKP MTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTL QKQTIPCVAHAVVIVNE
Sequences:
>Translated_337_residues MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQKAGKKLSDVN YMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKP MTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTL QKQTIPCVAHAVVIVNE >Mature_337_residues MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQKAGKKLSDVN YMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKP MTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTL QKQTIPCVAHAVVIVNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010894 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF07451 SpoVAD [H]
EC number: NA
Molecular weight: Translated: 36207; Mature: 36207
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKM CCCCCCCCEEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH VETASQQAIQKAGKKLSDVNYMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLC HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE IGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKPMTAQWTVTGAGSVLLAPNGD EEHHHHCCCCEEEEEECCCCCEEECCCCEECHHHCCCCCCCEEEEEEECCCEEEEECCCC GPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL CCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKK HHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH EFNKVMLVSTGALLSPTSTLQKQTIPCVAHAVVIVNE HCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEEC >Mature Secondary Structure MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKM CCCCCCCCEEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH VETASQQAIQKAGKKLSDVNYMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLC HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE IGSMLIDGGFADLVLSGTSSHYCTAERQFRFPLELGNQKPMTAQWTVTGAGSVLLAPNGD EEHHHHCCCCEEEEEECCCCCEEECCCCEECHHHCCCCCCCEEEEEEECCCEEEEECCCC GPKVKYVTVGKVIDEGIDDGNNMGPAMAPAAIDTIYSYFEDTNDDPNSFDIIATGDLGTL CCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH GKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGSGCGCSATVFAGYIYDKLRKK HHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH EFNKVMLVSTGALLSPTSTLQKQTIPCVAHAVVIVNE HCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]