| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is glpK1 [H]
Identifier: 126698321
GI number: 126698321
Start: 903936
End: 905462
Strand: Direct
Name: glpK1 [H]
Synonym: CD0741
Alternate gene names: 126698321
Gene position: 903936-905462 (Clockwise)
Preceding gene: 126698319
Following gene: 126698322
Centisome position: 21.07
GC content: 33.2
Gene sequence:
>1527_bases GTGAAATATGTATTAGCAATTGACCAAGGAACAACAGGAACAAGAGCAGTATTGATAAACGAAAAATCAGAGTTTGTTTT TAGCGATTATATGGAACATACTCAAATATATCCACAATCTGGATATGTTGAACATGACCCTATAGAAATTTGGAATAATA CAAAAACTGTGAGTAATAATGTATTACAACAAGCTTTTGAAAATGGAATCAATGAAAGTGATATAAAAGGAATTGGTATA GATAATCAAGGTGAAACAGTAATGTTATGGGATAAAAATACAGGTAAACCACTTTACAATGCTATTGTGTGGCAGTGCAG GAGAACTTATGATTATGTGGAAAATTTAAAGAATATACCAGGTTTAGAAAATAAGATAATAGATAAGACTGGGTTAATTA TAGACCCATATTTCTCAGGTACAAAAATTAAATGGGTAATAGATAATGTAAAAGGTGTAAAAGAAAAAATTAAAAATGGA GAAGTACTTGCAGGAACATTAGATAGTTGGTTAATATGGAAAATGACAGGAGGAAAATCTTTTTTAACTGATGTATCTAC AGCAGCAAGAACAATGCTTTTTAATATAAGAGATATGGATTGGGATAGAGAGTTGCTTGACATTATAGGAGTACCTAGAA GTATTTTAGCAGATATAATGCCTACGAGTGGTGATTTTGGAACTACAGATAAGGAGGCATTTTGTGGGGTTTCTATAAAA ATTACTGCTTCAATGGTAGACCAACCAGCAGCTTTATTTGGCAATGGATGTTTTGAACCAGGAATGGTTAAAAATACTTA TGGTACAGGATGTTTCCTATATATGAATATAGGTGAGGAACTAAATATAGCAGGTAATGGTATTTTGACAACTGTTGCTT GGAAAATAGGAGATAAGGTTACATATGCTTATGATGGTGGAGTGTATATAGCAGGTGCTGCAATACAATGGCTTAGAGAT GGCATTGGAGTTATAAAAAATTATTCAGAAACTGATGACATGGCAAATTCCATATCAAGTACTGGAGGTGTATATTTTGT ACCAGCATTTGCAGGTATAGCAGCACCTTATTGGGACCAATATGCTAGAGGTACAATGGTTGGGATAACAGGAAGTACTA AAAAAGAGCATATAGTAAGAGCGACTCTTGAGTCTGTTGCACTTCAAGTCAAAGATGTTGTTGATTCTATGAACTTAGCC TCAGGGAAAAAAATAAAAATGTTGAGAGTAGATGGTGGAATTACTAAAAATAACTTTACAATGCAATTTCAATCCGACAT ATTAGGCATACCAATTGAAATTGCAGAAAATCCTGAGACGACAGTACTTGGAGTAGGATATATGGCAGGTCTTTCTTGTG GTGTCTGGAACAGTATTGATGAAATTAGAAGTGAATTTACAATAAGCAAAAAATATATTCCAAATATGACTACTCAAAAA AGAGAAGAAATATTACTTGGATGGAACCAAGCAGTAAAAAGAGCTATGAATTGGGAAAACGATACCAAAAAGGTGTGTGC TAATTAA
Upstream 100 bases:
>100_bases ATCCACATGATGATATAAAATATAAATAACTTGAATAGATTATATATTCAAAAAATAAAAAAGAATTTATTAATTCTGAA AATAAAGGGGGACATTTAAA
Downstream 100 bases:
>100_bases GTTACAATAGAGTATTTTACATGTATAGGAGGAATTAAAAATGCCCTTTGATAAAATTATATTATACATAATGGCTGTGG GAGTGCTTTTAGGAGCGTTA
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase 2; Glycerokinase 2; GK 2 [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MKYVLAIDQGTTGTRAVLINEKSEFVFSDYMEHTQIYPQSGYVEHDPIEIWNNTKTVSNNVLQQAFENGINESDIKGIGI DNQGETVMLWDKNTGKPLYNAIVWQCRRTYDYVENLKNIPGLENKIIDKTGLIIDPYFSGTKIKWVIDNVKGVKEKIKNG EVLAGTLDSWLIWKMTGGKSFLTDVSTAARTMLFNIRDMDWDRELLDIIGVPRSILADIMPTSGDFGTTDKEAFCGVSIK ITASMVDQPAALFGNGCFEPGMVKNTYGTGCFLYMNIGEELNIAGNGILTTVAWKIGDKVTYAYDGGVYIAGAAIQWLRD GIGVIKNYSETDDMANSISSTGGVYFVPAFAGIAAPYWDQYARGTMVGITGSTKKEHIVRATLESVALQVKDVVDSMNLA SGKKIKMLRVDGGITKNNFTMQFQSDILGIPIEIAENPETTVLGVGYMAGLSCGVWNSIDEIRSEFTISKKYIPNMTTQK REEILLGWNQAVKRAMNWENDTKKVCAN
Sequences:
>Translated_508_residues MKYVLAIDQGTTGTRAVLINEKSEFVFSDYMEHTQIYPQSGYVEHDPIEIWNNTKTVSNNVLQQAFENGINESDIKGIGI DNQGETVMLWDKNTGKPLYNAIVWQCRRTYDYVENLKNIPGLENKIIDKTGLIIDPYFSGTKIKWVIDNVKGVKEKIKNG EVLAGTLDSWLIWKMTGGKSFLTDVSTAARTMLFNIRDMDWDRELLDIIGVPRSILADIMPTSGDFGTTDKEAFCGVSIK ITASMVDQPAALFGNGCFEPGMVKNTYGTGCFLYMNIGEELNIAGNGILTTVAWKIGDKVTYAYDGGVYIAGAAIQWLRD GIGVIKNYSETDDMANSISSTGGVYFVPAFAGIAAPYWDQYARGTMVGITGSTKKEHIVRATLESVALQVKDVVDSMNLA SGKKIKMLRVDGGITKNNFTMQFQSDILGIPIEIAENPETTVLGVGYMAGLSCGVWNSIDEIRSEFTISKKYIPNMTTQK REEILLGWNQAVKRAMNWENDTKKVCAN >Mature_508_residues MKYVLAIDQGTTGTRAVLINEKSEFVFSDYMEHTQIYPQSGYVEHDPIEIWNNTKTVSNNVLQQAFENGINESDIKGIGI DNQGETVMLWDKNTGKPLYNAIVWQCRRTYDYVENLKNIPGLENKIIDKTGLIIDPYFSGTKIKWVIDNVKGVKEKIKNG EVLAGTLDSWLIWKMTGGKSFLTDVSTAARTMLFNIRDMDWDRELLDIIGVPRSILADIMPTSGDFGTTDKEAFCGVSIK ITASMVDQPAALFGNGCFEPGMVKNTYGTGCFLYMNIGEELNIAGNGILTTVAWKIGDKVTYAYDGGVYIAGAAIQWLRD GIGVIKNYSETDDMANSISSTGGVYFVPAFAGIAAPYWDQYARGTMVGITGSTKKEHIVRATLESVALQVKDVVDSMNLA SGKKIKMLRVDGGITKNNFTMQFQSDILGIPIEIAENPETTVLGVGYMAGLSCGVWNSIDEIRSEFTISKKYIPNMTTQK REEILLGWNQAVKRAMNWENDTKKVCAN
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=502, Percent_Identity=42.6294820717131, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI4504007, Length=502, Percent_Identity=42.6294820717131, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI42794763, Length=506, Percent_Identity=41.897233201581, Blast_Score=394, Evalue=1e-110, Organism=Homo sapiens, GI41393575, Length=502, Percent_Identity=41.0358565737052, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI88196792, Length=518, Percent_Identity=32.8185328185328, Blast_Score=292, Evalue=7e-79, Organism=Escherichia coli, GI1790361, Length=498, Percent_Identity=48.5943775100402, Blast_Score=511, Evalue=1e-146, Organism=Escherichia coli, GI1789168, Length=498, Percent_Identity=21.8875502008032, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789987, Length=482, Percent_Identity=22.1991701244813, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17535599, Length=507, Percent_Identity=36.6863905325444, Blast_Score=338, Evalue=4e-93, Organism=Caenorhabditis elegans, GI71986140, Length=524, Percent_Identity=25.5725190839695, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71986147, Length=300, Percent_Identity=29.6666666666667, Blast_Score=137, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321755, Length=557, Percent_Identity=29.6229802513465, Blast_Score=252, Evalue=1e-67, Organism=Drosophila melanogaster, GI17864214, Length=510, Percent_Identity=39.2156862745098, Blast_Score=360, Evalue=1e-100, Organism=Drosophila melanogaster, GI24655555, Length=511, Percent_Identity=36.7906066536204, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24655560, Length=511, Percent_Identity=36.7906066536204, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24655570, Length=511, Percent_Identity=36.7906066536204, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24655574, Length=511, Percent_Identity=36.7906066536204, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24655565, Length=511, Percent_Identity=36.7906066536204, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24654573, Length=438, Percent_Identity=41.324200913242, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI19922058, Length=529, Percent_Identity=31.0018903591682, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI24652871, Length=499, Percent_Identity=31.6633266533066, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI21357867, Length=531, Percent_Identity=26.7419962335217, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24656367, Length=520, Percent_Identity=27.6923076923077, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24656372, Length=376, Percent_Identity=27.9255319148936, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI45552909, Length=329, Percent_Identity=27.9635258358663, Blast_Score=138, Evalue=1e-32,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 56218; Mature: 56218
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVLAIDQGTTGTRAVLINEKSEFVFSDYMEHTQIYPQSGYVEHDPIEIWNNTKTVSNN CEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEECCCCHHHHH VLQQAFENGINESDIKGIGIDNQGETVMLWDKNTGKPLYNAIVWQCRRTYDYVENLKNIP HHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC GLENKIIDKTGLIIDPYFSGTKIKWVIDNVKGVKEKIKNGEVLAGTLDSWLIWKMTGGKS CCCHHHHCCCCCEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCEEEEEEECCCH FLTDVSTAARTMLFNIRDMDWDRELLDIIGVPRSILADIMPTSGDFGTTDKEAFCGVSIK HHHHHHHHHHHHEEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCCEEEE ITASMVDQPAALFGNGCFEPGMVKNTYGTGCFLYMNIGEELNIAGNGILTTVAWKIGDKV EEEHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEEEEECCCEE TYAYDGGVYIAGAAIQWLRDGIGVIKNYSETDDMANSISSTGGVYFVPAFAGIAAPYWDQ EEEECCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHHCCHHHHH YARGTMVGITGSTKKEHIVRATLESVALQVKDVVDSMNLASGKKIKMLRVDGGITKNNFT HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCCEE MQFQSDILGIPIEIAENPETTVLGVGYMAGLSCGVWNSIDEIRSEFTISKKYIPNMTTQK EEEECCCCCCEEEECCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHEECHHHCCCCCHHH REEILLGWNQAVKRAMNWENDTKKVCAN HHHHHCCHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure MKYVLAIDQGTTGTRAVLINEKSEFVFSDYMEHTQIYPQSGYVEHDPIEIWNNTKTVSNN CEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEECCCCHHHHH VLQQAFENGINESDIKGIGIDNQGETVMLWDKNTGKPLYNAIVWQCRRTYDYVENLKNIP HHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC GLENKIIDKTGLIIDPYFSGTKIKWVIDNVKGVKEKIKNGEVLAGTLDSWLIWKMTGGKS CCCHHHHCCCCCEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCEEEEEEECCCH FLTDVSTAARTMLFNIRDMDWDRELLDIIGVPRSILADIMPTSGDFGTTDKEAFCGVSIK HHHHHHHHHHHHEEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCCEEEE ITASMVDQPAALFGNGCFEPGMVKNTYGTGCFLYMNIGEELNIAGNGILTTVAWKIGDKV EEEHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEEEEECCCEE TYAYDGGVYIAGAAIQWLRDGIGVIKNYSETDDMANSISSTGGVYFVPAFAGIAAPYWDQ EEEECCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHHCCHHHHH YARGTMVGITGSTKKEHIVRATLESVALQVKDVVDSMNLASGKKIKMLRVDGGITKNNFT HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCCEE MQFQSDILGIPIEIAENPETTVLGVGYMAGLSCGVWNSIDEIRSEFTISKKYIPNMTTQK EEEECCCCCCEEEECCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHEECHHHCCCCCHHH REEILLGWNQAVKRAMNWENDTKKVCAN HHHHHCCHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]