| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126698319
Identifier: 126698319
GI number: 126698319
Start: 901618
End: 902130
Strand: Direct
Name: 126698319
Synonym: CD0739
Alternate gene names: NA
Gene position: 901618-902130 (Clockwise)
Preceding gene: 126698317
Following gene: 126698321
Centisome position: 21.02
GC content: 28.46
Gene sequence:
>513_bases ATGAAAGTAAAAAAATTTAAAAGTGGTATAGTAATGGCATTAACAGTAATGGCAATTGGAGCATCATTGACAAATGTATC AGCTATGGAATTAAACAAGAGTAAAGAGTTTGAAACTAAATACAATGAAATGAAGAGGGATTTTCAAGAGGAATATGGAA AAGAAGACAAATTTAATATAACATTGGATGATGAATTTACAAAAGAAGAAGTAAATGGAGCTAAAGGGATTATAAAGACA ACTAATAAAATGAATAATGAGGTTGTAGTATTAAATTATTTTGATGAAATGAAATCTGGAATTGAATTTGAGTTGAAGCC AAAAGCAGAAAAAAATGCAATTTTGAGAGATGAATTTCAACAAGGTTATGGAAAGGAAGATAAATTCAAAGTTGTGCTAG ATGATGAATTTACAAAAGAAGAGGTAAATGGAGCTAAGGGCATTATAAAGACTACAGATAAAGAGACAGGTGAGGTTATC ATATATAATTACTTTGATGAGCTTGAAAAATAA
Upstream 100 bases:
>100_bases TGGTTACATAATAGTAATTTTAGTTACAAGAATGAAACTGTAAAACTTAGGATTTTCTTTATATAATTTCATTGAGAACA TTTAATTTAGGAGGTAAGAT
Downstream 100 bases:
>100_bases TGCTTAAAGATTACTTTGATTGAATGAAAAGGTAATTGTGTTGAGAATATTAAATGACTGAATAAAAACAGTTGTATCAA AAACAAACAATAATAGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKVKKFKSGIVMALTVMAIGASLTNVSAMELNKSKEFETKYNEMKRDFQEEYGKEDKFNITLDDEFTKEEVNGAKGIIKT TNKMNNEVVVLNYFDEMKSGIEFELKPKAEKNAILRDEFQQGYGKEDKFKVVLDDEFTKEEVNGAKGIIKTTDKETGEVI IYNYFDELEK
Sequences:
>Translated_170_residues MKVKKFKSGIVMALTVMAIGASLTNVSAMELNKSKEFETKYNEMKRDFQEEYGKEDKFNITLDDEFTKEEVNGAKGIIKT TNKMNNEVVVLNYFDEMKSGIEFELKPKAEKNAILRDEFQQGYGKEDKFKVVLDDEFTKEEVNGAKGIIKTTDKETGEVI IYNYFDELEK >Mature_170_residues MKVKKFKSGIVMALTVMAIGASLTNVSAMELNKSKEFETKYNEMKRDFQEEYGKEDKFNITLDDEFTKEEVNGAKGIIKT TNKMNNEVVVLNYFDEMKSGIEFELKPKAEKNAILRDEFQQGYGKEDKFKVVLDDEFTKEEVNGAKGIIKTTDKETGEVI IYNYFDELEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19591; Mature: 19591
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKKFKSGIVMALTVMAIGASLTNVSAMELNKSKEFETKYNEMKRDFQEEYGKEDKFNI CCCHHHHCCHHHHHHHHHHCCHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE TLDDEFTKEEVNGAKGIIKTTNKMNNEVVVLNYFDEMKSGIEFELKPKAEKNAILRDEFQ EECCCCCHHHCCCCCCEEECCCCCCCCEEEEEEHHHHHCCCEEEECCCCCCCCHHHHHHH QGYGKEDKFKVVLDDEFTKEEVNGAKGIIKTTDKETGEVIIYNYFDELEK HCCCCCCCEEEEECCCCCHHHCCCCCCEEECCCCCCCCEEEECCHHHHCC >Mature Secondary Structure MKVKKFKSGIVMALTVMAIGASLTNVSAMELNKSKEFETKYNEMKRDFQEEYGKEDKFNI CCCHHHHCCHHHHHHHHHHCCHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE TLDDEFTKEEVNGAKGIIKTTNKMNNEVVVLNYFDEMKSGIEFELKPKAEKNAILRDEFQ EECCCCCHHHCCCCCCEEECCCCCCCCEEEEEEHHHHHCCCEEEECCCCCCCCHHHHHHH QGYGKEDKFKVVLDDEFTKEEVNGAKGIIKTTDKETGEVIIYNYFDELEK HCCCCCCCEEEEECCCCCHHHCCCCCCEEECCCCCCCCEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA