Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698280

Identifier: 126698280

GI number: 126698280

Start: 853165

End: 853755

Strand: Direct

Name: 126698280

Synonym: CD0701

Alternate gene names: NA

Gene position: 853165-853755 (Clockwise)

Preceding gene: 126698279

Following gene: 126698281

Centisome position: 19.89

GC content: 31.64

Gene sequence:

>591_bases
ATGAACAAAGTAATGGTTAAAATCCATGGCGCTGAATATCCAATGGTTGGAGACAAATCAGAGAAGTTTATGATTAGTAT
TGCTGATTTTGTAGACAAAGAAATGGATAAAATAACACGTCAAAACCCGAAATTGAGCTTATCAGTTGCTGCGATATTAA
CTGCATTAAATATATCAGACCTTTTATTTGAATGTTCAGATGAGAATGAGAAGTTGATTAAAGCGAATGAAGAATTGAGT
AAGAAGGTTGGAGCATCTAATGAAGAGCTTCAATTAGAAATCAAATCTTTAAAGCTTACGATAGCAGAAAAAGAAGCAGA
AAATCGTGAAGCTGAAACTAAGATGAAAGAGTTAATTGAGATTATAGAAAATAAAAAGCAAGAAATATTCGAACTTAGTA
ATACGACAGAAGGTTCTAGAGCAGAGTTAGATGCTTATAAAAACAAGATTGAGGAGTTAAGTACTCAACTTGAAGAAGCA
AATGAAAGAGCTACTATAGCTGAAAACTTAGCTTCTGAGTTTCAAAACAAAGCTTATGATTTACAGTTAAAATGTACAGG
GTTAAATAATGATGCAAAAAATGTGGAATAA

Upstream 100 bases:

>100_bases
AGATGTAGCTAAGGTGCATGATAAGATATTAAGTGAATTAAGCGAAAAATTAAATGCTAACTTAAGATCAAATTAACAAC
TAATGTCGGGGGAGGTTAGG

Downstream 100 bases:

>100_bases
ACTAAAAGATTTGCTGTCTCTTGTTTTTTGAGACAGCTTCTTTTAATGTATAAATATAAATGCTATATAAATATAGATAA
TGTTTAAATGTAAATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISDLLFECSDENEKLIKANEELS
KKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIEIIENKKQEIFELSNTTEGSRAELDAYKNKIEELSTQLEEA
NERATIAENLASEFQNKAYDLQLKCTGLNNDAKNVE

Sequences:

>Translated_196_residues
MNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISDLLFECSDENEKLIKANEELS
KKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIEIIENKKQEIFELSNTTEGSRAELDAYKNKIEELSTQLEEA
NERATIAENLASEFQNKAYDLQLKCTGLNNDAKNVE
>Mature_196_residues
MNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISDLLFECSDENEKLIKANEELS
KKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIEIIENKKQEIFELSNTTEGSRAELDAYKNKIEELSTQLEEA
NERATIAENLASEFQNKAYDLQLKCTGLNNDAKNVE

Specific function: Unknown

COG id: COG3027

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22148; Mature: 22148

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISD
CCEEEEEEECCCCCCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLFECSDENEKLIKANEELSKKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIE
HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHEEEEEHEEEEEEHHHHHCHHHHHHHHHHHH
IIENKKQEIFELSNTTEGSRAELDAYKNKIEELSTQLEEANERATIAENLASEFQNKAYD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LQLKCTGLNNDAKNVE
EEEEEECCCCCCCCCC
>Mature Secondary Structure
MNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISD
CCEEEEEEECCCCCCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLFECSDENEKLIKANEELSKKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIE
HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHEEEEEHEEEEEEHHHHHCHHHHHHHHHHHH
IIENKKQEIFELSNTTEGSRAELDAYKNKIEELSTQLEEANERATIAENLASEFQNKAYD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LQLKCTGLNNDAKNVE
EEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA