Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698267

Identifier: 126698267

GI number: 126698267

Start: 832696

End: 833226

Strand: Direct

Name: 126698267

Synonym: CD0688

Alternate gene names: NA

Gene position: 832696-833226 (Clockwise)

Preceding gene: 126698266

Following gene: 126698268

Centisome position: 19.41

GC content: 30.51

Gene sequence:

>531_bases
ATGGATTGTTTTGTAAACCCAATTAAATGCAAGTTATTGCTTGAAGTTTTTTCAAATAATCGAACTACAGCTAAACAATT
AGGAGAAAAATTTCAAGATATATCAAAGGCAACGCTTTATCGTTACCTTAATAAAATGTTGAAAGATGATATTATAAAAG
TGGTTGAAGAAAATAAAATAAGGGGAACTGTTGAAAAAGTATATGCTATGAAGTTAGATATAGCTGATGATGTGAACAAA
ATTATAGATGAGAACTCTGGAGAAGAATATGCTCAACTGTTTACTCAATATATGATGGGATTTTTAAGAGAATTTTATGA
ATACGCTGAAAGAAAGGAAAAGGATATCCTAAAAGATGGTTCAGGATTTTCTGTCTGTCCAGTATATGCTAGTATTGATG
AGATAGTTGAAGTGAGTAAAAAAATTGCTAGTATACTAGAACCTCTAAGAAATAACTCACATGAAGAAGGTAGAAGAATG
CATTCTATAGGAGTGATAATTACTCCACCTAAAGAGGATGAAGGGAAATAA

Upstream 100 bases:

>100_bases
GTATAAAGCTTTCAATCAATCTTGAATTAATATTATCAACATGATAATATTATCTTATTAATAATATAAATAAGGGGGAG
ATAATATGAATGAGAAACTA

Downstream 100 bases:

>100_bases
ATCTGATTTACATGGGGTAGAGCCAATTTATACAGGGAATCGTTTTATGATTTACATATGTATCCAGAGCAAAGTATCTC
TGCTTGGATTGTAAATAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MDCFVNPIKCKLLLEVFSNNRTTAKQLGEKFQDISKATLYRYLNKMLKDDIIKVVEENKIRGTVEKVYAMKLDIADDVNK
IIDENSGEEYAQLFTQYMMGFLREFYEYAERKEKDILKDGSGFSVCPVYASIDEIVEVSKKIASILEPLRNNSHEEGRRM
HSIGVIITPPKEDEGK

Sequences:

>Translated_176_residues
MDCFVNPIKCKLLLEVFSNNRTTAKQLGEKFQDISKATLYRYLNKMLKDDIIKVVEENKIRGTVEKVYAMKLDIADDVNK
IIDENSGEEYAQLFTQYMMGFLREFYEYAERKEKDILKDGSGFSVCPVYASIDEIVEVSKKIASILEPLRNNSHEEGRRM
HSIGVIITPPKEDEGK
>Mature_176_residues
MDCFVNPIKCKLLLEVFSNNRTTAKQLGEKFQDISKATLYRYLNKMLKDDIIKVVEENKIRGTVEKVYAMKLDIADDVNK
IIDENSGEEYAQLFTQYMMGFLREFYEYAERKEKDILKDGSGFSVCPVYASIDEIVEVSKKIASILEPLRNNSHEEGRRM
HSIGVIITPPKEDEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20300; Mature: 20300

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCFVNPIKCKLLLEVFSNNRTTAKQLGEKFQDISKATLYRYLNKMLKDDIIKVVEENKI
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTVEKVYAMKLDIADDVNKIIDENSGEEYAQLFTQYMMGFLREFYEYAERKEKDILKDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGFSVCPVYASIDEIVEVSKKIASILEPLRNNSHEEGRRMHSIGVIITPPKEDEGK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MDCFVNPIKCKLLLEVFSNNRTTAKQLGEKFQDISKATLYRYLNKMLKDDIIKVVEENKI
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTVEKVYAMKLDIADDVNKIIDENSGEEYAQLFTQYMMGFLREFYEYAERKEKDILKDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGFSVCPVYASIDEIVEVSKKIASILEPLRNNSHEEGRRMHSIGVIITPPKEDEGK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA