Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698219

Identifier: 126698219

GI number: 126698219

Start: 763670

End: 764077

Strand: Direct

Name: 126698219

Synonym: CD0641

Alternate gene names: NA

Gene position: 763670-764077 (Clockwise)

Preceding gene: 126698218

Following gene: 126698220

Centisome position: 17.8

GC content: 25.49

Gene sequence:

>408_bases
ATGTCTAAACAACAAACTGGTATTAAATCAACACTTATTTCAGAAATATTGAGAATTTCTTATTGTATTGGAGCTACATT
AGTAAATAAGTATTTTTTTAAAGGAAGTAGTATTGAATATCTTCCTATAATTATTTGGGTATTAGCTATGGGAGCTCAGT
GGGTCTATAATAAAAAGTATGATGATTTAATTGATGAGGCATCAAAATGTATACTATCAAGAGTTAATGATATTGCAATA
AAAGTATTGTTTTTTTCTGTAGCTATAGTATCTATATTTCTTGTAACTTTGGACATAAATGTGTCAAATTTAAATATAGG
AATGTCTTTATTAGTCATTTTGTTTATTCAATCCTTGTTGAAGTTAATTCTATTTATATATTTTGACAGAAAGGGGATAT
ACAATTAG

Upstream 100 bases:

>100_bases
TTTGTTGCAAAATAATATTTTTATTGAAATTTATTCAAAAAAGTTATATATTTATAACAAGAGGTGTTATAAATACATAA
CTTTTTAAGGGGGATTTTAT

Downstream 100 bases:

>100_bases
GTGTCAGTATTACTAAAGACAAAAATTAAATCCTATAGAGAAAAGAACCTTATGACACAAGGTGAACTTGCAAAGTCAGT
AGGAGTAAGACGTGAAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKCILSRVNDIAI
KVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN

Sequences:

>Translated_135_residues
MSKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKCILSRVNDIAI
KVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN
>Mature_134_residues
SKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKCILSRVNDIAIK
VLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15370; Mature: 15238

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCHH
DDLIDEASKCILSRVNDIAIKVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KLILFIYFDRKGIYN
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCHH
DDLIDEASKCILSRVNDIAIKVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KLILFIYFDRKGIYN
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA