| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698219
Identifier: 126698219
GI number: 126698219
Start: 763670
End: 764077
Strand: Direct
Name: 126698219
Synonym: CD0641
Alternate gene names: NA
Gene position: 763670-764077 (Clockwise)
Preceding gene: 126698218
Following gene: 126698220
Centisome position: 17.8
GC content: 25.49
Gene sequence:
>408_bases ATGTCTAAACAACAAACTGGTATTAAATCAACACTTATTTCAGAAATATTGAGAATTTCTTATTGTATTGGAGCTACATT AGTAAATAAGTATTTTTTTAAAGGAAGTAGTATTGAATATCTTCCTATAATTATTTGGGTATTAGCTATGGGAGCTCAGT GGGTCTATAATAAAAAGTATGATGATTTAATTGATGAGGCATCAAAATGTATACTATCAAGAGTTAATGATATTGCAATA AAAGTATTGTTTTTTTCTGTAGCTATAGTATCTATATTTCTTGTAACTTTGGACATAAATGTGTCAAATTTAAATATAGG AATGTCTTTATTAGTCATTTTGTTTATTCAATCCTTGTTGAAGTTAATTCTATTTATATATTTTGACAGAAAGGGGATAT ACAATTAG
Upstream 100 bases:
>100_bases TTTGTTGCAAAATAATATTTTTATTGAAATTTATTCAAAAAAGTTATATATTTATAACAAGAGGTGTTATAAATACATAA CTTTTTAAGGGGGATTTTAT
Downstream 100 bases:
>100_bases GTGTCAGTATTACTAAAGACAAAAATTAAATCCTATAGAGAAAAGAACCTTATGACACAAGGTGAACTTGCAAAGTCAGT AGGAGTAAGACGTGAAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKCILSRVNDIAI KVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN
Sequences:
>Translated_135_residues MSKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKCILSRVNDIAI KVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN >Mature_134_residues SKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKCILSRVNDIAIK VLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15370; Mature: 15238
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCHH DDLIDEASKCILSRVNDIAIKVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KLILFIYFDRKGIYN HHHHHHHHCCCCCCC >Mature Secondary Structure SKQQTGIKSTLISEILRISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCHH DDLIDEASKCILSRVNDIAIKVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KLILFIYFDRKGIYN HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA