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The map label for this gene is 126698220

Identifier: 126698220

GI number: 126698220

Start: 764078

End: 764296

Strand: Direct

Name: 126698220

Synonym: CD0642

Alternate gene names: NA

Gene position: 764078-764296 (Clockwise)

Preceding gene: 126698219

Following gene: 126698221

Centisome position: 17.81

GC content: 30.14

Gene sequence:

>219_bases
GTGTCAGTATTACTAAAGACAAAAATTAAATCCTATAGAGAAAAGAACCTTATGACACAAGGTGAACTTGCAAAGTCAGT
AGGAGTAAGACGTGAAACTATTGTACATTTAGAAAATGGTCGCTACAATCCTTCTTTAAAACTGGCAATGGATATTGCTA
AGGTATTTGATACAATTGTAGAAGAGTTGTTTGAATTTATTGAAGAAAATAATATTTAA

Upstream 100 bases:

>100_bases
TTTAAATATAGGAATGTCTTTATTAGTCATTTTGTTTATTCAATCCTTGTTGAAGTTAATTCTATTTATATATTTTGACA
GAAAGGGGATATACAATTAG

Downstream 100 bases:

>100_bases
ATTTCATGTATTACTTATGCATTAGAGAATGAATTAATTATAGGTAAAAAACCAAGCTTATAGATTAGAGAATAAATGAC
TTATAGATGAAAAACCAAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSVLLKTKIKSYREKNLMTQGELAKSVGVRRETIVHLENGRYNPSLKLAMDIAKVFDTIVEELFEFIEENNI

Sequences:

>Translated_72_residues
MSVLLKTKIKSYREKNLMTQGELAKSVGVRRETIVHLENGRYNPSLKLAMDIAKVFDTIVEELFEFIEENNI
>Mature_71_residues
SVLLKTKIKSYREKNLMTQGELAKSVGVRRETIVHLENGRYNPSLKLAMDIAKVFDTIVEELFEFIEENNI

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8343; Mature: 8212

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLLKTKIKSYREKNLMTQGELAKSVGVRRETIVHLENGRYNPSLKLAMDIAKVFDTIV
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHH
EELFEFIEENNI
HHHHHHHHCCCC
>Mature Secondary Structure 
SVLLKTKIKSYREKNLMTQGELAKSVGVRRETIVHLENGRYNPSLKLAMDIAKVFDTIV
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHH
EELFEFIEENNI
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]