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The map label for this gene is farR [C]

Identifier: 126698163

GI number: 126698163

Start: 702215

End: 703690

Strand: Direct

Name: farR [C]

Synonym: CD0585

Alternate gene names: 126698163

Gene position: 702215-703690 (Clockwise)

Preceding gene: 126698160

Following gene: 126698164

Centisome position: 16.37

GC content: 26.15

Gene sequence:

>1476_bases
ATGAAGAGAAAACCACAATATTTAATTATTTTTGAGCATATAATTCAACAAATTTATACTGGTAAAATTACTATTGGAGA
TAGGCTTGATTCTATAAAAAGCATGTCAGAAGAATATATGGTATCAAAAAATACTATAAAAACTGTAATAAAAATGCTCT
CAGAAAAGGGCTTTATAGAGACAAAAGCTGGTTCTAGACCAGTTTTAATCCAGAGTACGAGTAAACAATCAATAGAATCT
GACTTATTATATGAGAAGATTTTACAAATATCAGAAATATATAAGATTTTTAGTTTAATATTTCCTTCTATTGCTATGTA
CAATATTAAAAGATTTACATCTAAAGACTTTGAAGAATTAAACGAGATTATCGATTGTATGGAAAAAAATAGTTCTAATT
ATTTAGTCTTTAAAGAACAAAGGCTAAAATATATAAATAAACTAATAAGTAAAACAAATAATTTCCTGATTCACCATTTT
TGTGAGATTATTCAGCATGATGTCATTATTTCACAATTGGCCTATAATTTCGATAACTTGGATAACTTGGATAATTGTTG
TATAGACTTTTTTCGTAATAAATACATAGAGCAGGTAAGAAAAACTTACTTATATGGATTGGACGGGAATCTAATTGAAT
TTAAAAAACTATTAACATATATGTATAAAGCTTGTAGAGAATCCATACTTAAAATGGTAGAAAATCGTGCTCCACAAAGT
ATAGATACAAGTAGTTTTAATTCTGTAACGTTGGAAAAATGTTATTTATATGACTTAATTGTTTCAGATGTAATTTGTCA
AATTTTTGAAGGCAATATTAAAATAGGAGATTGTCTACCATCAATTACTTCGATAATTAATAGATATAATGTATCACTTC
CAACAGTTAGAAGTGCCTATAATGAGCTAAATGAATTGGGAATTGCTAAAACAATTAATGGCAAGGGAACATATGTAACG
CTTTTTTCTGAATATGATGATGATTATATAAATACAGAAGAAGGAGCTAAAAGGTTGAGTTTGCTTTTGGATGCTATGGA
GTTTGTTACGATTACTCTTGAGGATGTAGTACTTTTACTAGGAAATAAAATGGATTTGATAGCTGTAGATAAAATAGAAA
CTCATTTAAGGTACTTACAAAATAATTGTGAAGAGTGTAAGGTTTATCCAGATTTTGTTTTACTTTGTAAGATAGTAGAT
TATACACAAATTTATGTATTACAGGAAACATTTTTGCATTTAAAACAATATATGATATTTGGAATCTATTTAGAGAGATT
TTTTCATGAAGAATATAATGAAATTTTGAAAACACGTTTTGATGTATGTTTTGAGATACTTAGGTATTTAAAAAAAGGAG
ATGTTGAGAGATTTGCAGAATCTTTTTCTAATATTTTTAAGGAGTCTTTACAATATTTGAAAAAGGTTATATCTTCATTA
AATGTTGATATGAGATTAAAATTAGGTATATTGTAA

Upstream 100 bases:

>100_bases
ATAGATTATGAGGAAAAAATAAGCAACTATTTTGCCCTATTAAATAAAAGTAAATATACCTTACAAAAACAATAAATCTA
ATTTATCGAAGAGGAAAAAT

Downstream 100 bases:

>100_bases
CAAATAGTAAATGTTTTGTGGAGATAAAATCCTTTTTTTAGTTGAAAAATCCCATAAAGTAAGCATTTTTACTGTGTGCA
ATACAATAATGTAAAGGATA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKRKPQYLIIFEHIIQQIYTGKITIGDRLDSIKSMSEEYMVSKNTIKTVIKMLSEKGFIETKAGSRPVLIQSTSKQSIES
DLLYEKILQISEIYKIFSLIFPSIAMYNIKRFTSKDFEELNEIIDCMEKNSSNYLVFKEQRLKYINKLISKTNNFLIHHF
CEIIQHDVIISQLAYNFDNLDNLDNCCIDFFRNKYIEQVRKTYLYGLDGNLIEFKKLLTYMYKACRESILKMVENRAPQS
IDTSSFNSVTLEKCYLYDLIVSDVICQIFEGNIKIGDCLPSITSIINRYNVSLPTVRSAYNELNELGIAKTINGKGTYVT
LFSEYDDDYINTEEGAKRLSLLLDAMEFVTITLEDVVLLLGNKMDLIAVDKIETHLRYLQNNCEECKVYPDFVLLCKIVD
YTQIYVLQETFLHLKQYMIFGIYLERFFHEEYNEILKTRFDVCFEILRYLKKGDVERFAESFSNIFKESLQYLKKVISSL
NVDMRLKLGIL

Sequences:

>Translated_491_residues
MKRKPQYLIIFEHIIQQIYTGKITIGDRLDSIKSMSEEYMVSKNTIKTVIKMLSEKGFIETKAGSRPVLIQSTSKQSIES
DLLYEKILQISEIYKIFSLIFPSIAMYNIKRFTSKDFEELNEIIDCMEKNSSNYLVFKEQRLKYINKLISKTNNFLIHHF
CEIIQHDVIISQLAYNFDNLDNLDNCCIDFFRNKYIEQVRKTYLYGLDGNLIEFKKLLTYMYKACRESILKMVENRAPQS
IDTSSFNSVTLEKCYLYDLIVSDVICQIFEGNIKIGDCLPSITSIINRYNVSLPTVRSAYNELNELGIAKTINGKGTYVT
LFSEYDDDYINTEEGAKRLSLLLDAMEFVTITLEDVVLLLGNKMDLIAVDKIETHLRYLQNNCEECKVYPDFVLLCKIVD
YTQIYVLQETFLHLKQYMIFGIYLERFFHEEYNEILKTRFDVCFEILRYLKKGDVERFAESFSNIFKESLQYLKKVISSL
NVDMRLKLGIL
>Mature_491_residues
MKRKPQYLIIFEHIIQQIYTGKITIGDRLDSIKSMSEEYMVSKNTIKTVIKMLSEKGFIETKAGSRPVLIQSTSKQSIES
DLLYEKILQISEIYKIFSLIFPSIAMYNIKRFTSKDFEELNEIIDCMEKNSSNYLVFKEQRLKYINKLISKTNNFLIHHF
CEIIQHDVIISQLAYNFDNLDNLDNCCIDFFRNKYIEQVRKTYLYGLDGNLIEFKKLLTYMYKACRESILKMVENRAPQS
IDTSSFNSVTLEKCYLYDLIVSDVICQIFEGNIKIGDCLPSITSIINRYNVSLPTVRSAYNELNELGIAKTINGKGTYVT
LFSEYDDDYINTEEGAKRLSLLLDAMEFVTITLEDVVLLLGNKMDLIAVDKIETHLRYLQNNCEECKVYPDFVLLCKIVD
YTQIYVLQETFLHLKQYMIFGIYLERFFHEEYNEILKTRFDVCFEILRYLKKGDVERFAESFSNIFKESLQYLKKVISSL
NVDMRLKLGIL

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57599; Mature: 57599

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKPQYLIIFEHIIQQIYTGKITIGDRLDSIKSMSEEYMVSKNTIKTVIKMLSEKGFIE
CCCCCCEEEHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TKAGSRPVLIQSTSKQSIESDLLYEKILQISEIYKIFSLIFPSIAMYNIKRFTSKDFEEL
ECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEIIDCMEKNSSNYLVFKEQRLKYINKLISKTNNFLIHHFCEIIQHDVIISQLAYNFDNL
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DNLDNCCIDFFRNKYIEQVRKTYLYGLDGNLIEFKKLLTYMYKACRESILKMVENRAPQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IDTSSFNSVTLEKCYLYDLIVSDVICQIFEGNIKIGDCLPSITSIINRYNVSLPTVRSAY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHH
NELNELGIAKTINGKGTYVTLFSEYDDDYINTEEGAKRLSLLLDAMEFVTITLEDVVLLL
HHHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNKMDLIAVDKIETHLRYLQNNCEECKVYPDFVLLCKIVDYTQIYVLQETFLHLKQYMIF
CCCCCEEEHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIYLERFFHEEYNEILKTRFDVCFEILRYLKKGDVERFAESFSNIFKESLQYLKKVISSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NVDMRLKLGIL
CCCEEEEECCC
>Mature Secondary Structure
MKRKPQYLIIFEHIIQQIYTGKITIGDRLDSIKSMSEEYMVSKNTIKTVIKMLSEKGFIE
CCCCCCEEEHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TKAGSRPVLIQSTSKQSIESDLLYEKILQISEIYKIFSLIFPSIAMYNIKRFTSKDFEEL
ECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEIIDCMEKNSSNYLVFKEQRLKYINKLISKTNNFLIHHFCEIIQHDVIISQLAYNFDNL
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DNLDNCCIDFFRNKYIEQVRKTYLYGLDGNLIEFKKLLTYMYKACRESILKMVENRAPQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IDTSSFNSVTLEKCYLYDLIVSDVICQIFEGNIKIGDCLPSITSIINRYNVSLPTVRSAY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHH
NELNELGIAKTINGKGTYVTLFSEYDDDYINTEEGAKRLSLLLDAMEFVTITLEDVVLLL
HHHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNKMDLIAVDKIETHLRYLQNNCEECKVYPDFVLLCKIVDYTQIYVLQETFLHLKQYMIF
CCCCCEEEHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIYLERFFHEEYNEILKTRFDVCFEILRYLKKGDVERFAESFSNIFKESLQYLKKVISSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NVDMRLKLGIL
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA