| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698153
Identifier: 126698153
GI number: 126698153
Start: 686149
End: 687240
Strand: Direct
Name: 126698153
Synonym: CD0575
Alternate gene names: NA
Gene position: 686149-687240 (Clockwise)
Preceding gene: 126698152
Following gene: 126698154
Centisome position: 15.99
GC content: 25.92
Gene sequence:
>1092_bases ATGATAGAAAAAGTAGAAGAAAAATCTAAGATTATTAAAACATCAAAAGAATATAAGCGAACTATAATTGAAGAAAAAGA TAAAGAATGGACCAAAAAATTAAATGATATACTTAGTAGAAGTAGTTTTTCTAATGATGAATTAGATAAAATCAAGGCAT TAATTCCAAAAGAGATTTTGACTAATGAAAATGTTGGAGAAGTTGTGACTGAAGATGGATATGCTAAGCCTGAGTATGAT GAGGTATTTAAATCATTGTTCACTTTAAATAATGAATATGATTTACTTGTAAATTTTATAAATGATATCCTAAAAGATGC TCCATATGCTAACAGGAATATCAAACCGTTCACTCAAATAAAGAGAATAATTAGAGTTGAAACTGACCCAACAATTAATT ACATTGGAGAGAAAAGACCTAGACTTGATATTTTGGCTGAAGATGAAGAAAATAATCATATAAATATTGAGATGCAAAGA GCTTTTGAGAACGATTATTTGGAAAGAGCTGAATATTATCTTAGTCGTGTACATGGTAGAAAGTTAGAAGAAGGTAAAGA GTATAAAGAAATTGGAAAAACTATTGGAATACATATACTAAATCATGTAAAATATAATCACATAGAAGATTATGTAAATT GCCTGAGATTAACAATGGACGGGCATCCAGATATTTATTCTAGTAAAACTGCATTATATTTTATAGAGCTTCCAAAAATT CATAAATCTGACTATATAGTAAATAGAATTATGCTATGGGGAAAACTTATTAGTAATCCTTCTAACTTAGATGTAAGAGT TATAGCTAAGAATGATTCTATTATTAAAAAAGCACTTGATAGATTAAAAGAATTAGGTAGCAATGAAGAATATTTATTAA ATCTGAAAAGAGGTGCTTATATCATGAATAAAAGTAGAAATTTTAAAGAAGAGATTGAAAGAGAGACAGCAATTAGAGTT GCAAAAGAAAAAGATTATAAAATAATTATAATGTTGAAAAAAAATGGTTTTAAATTAGATGACATATTAAATAAATTTAA TGATTTTGACTTAAGTGAAGATGAGATAAAAGAAGTATATGAAAATAATTGA
Upstream 100 bases:
>100_bases TAAGAAAGTGTTTATGGAGCAAGAACTTTTAAAAGAGGTAGTGACTTAGTTTAATTTCAAGAAATGATAAATACAAAAGA GGAAAAAGAGAGGTGTTGAA
Downstream 100 bases:
>100_bases TGATAAATAAAAAGTGAACTTATATAAGTTTGCTGAATCGGAGTCTGGAAATATTTATATGTATTTTTTAATGAATGAAA ATTTATTTTAAAAACAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MIEKVEEKSKIIKTSKEYKRTIIEEKDKEWTKKLNDILSRSSFSNDELDKIKALIPKEILTNENVGEVVTEDGYAKPEYD EVFKSLFTLNNEYDLLVNFINDILKDAPYANRNIKPFTQIKRIIRVETDPTINYIGEKRPRLDILAEDEENNHINIEMQR AFENDYLERAEYYLSRVHGRKLEEGKEYKEIGKTIGIHILNHVKYNHIEDYVNCLRLTMDGHPDIYSSKTALYFIELPKI HKSDYIVNRIMLWGKLISNPSNLDVRVIAKNDSIIKKALDRLKELGSNEEYLLNLKRGAYIMNKSRNFKEEIERETAIRV AKEKDYKIIIMLKKNGFKLDDILNKFNDFDLSEDEIKEVYENN
Sequences:
>Translated_363_residues MIEKVEEKSKIIKTSKEYKRTIIEEKDKEWTKKLNDILSRSSFSNDELDKIKALIPKEILTNENVGEVVTEDGYAKPEYD EVFKSLFTLNNEYDLLVNFINDILKDAPYANRNIKPFTQIKRIIRVETDPTINYIGEKRPRLDILAEDEENNHINIEMQR AFENDYLERAEYYLSRVHGRKLEEGKEYKEIGKTIGIHILNHVKYNHIEDYVNCLRLTMDGHPDIYSSKTALYFIELPKI HKSDYIVNRIMLWGKLISNPSNLDVRVIAKNDSIIKKALDRLKELGSNEEYLLNLKRGAYIMNKSRNFKEEIERETAIRV AKEKDYKIIIMLKKNGFKLDDILNKFNDFDLSEDEIKEVYENN >Mature_363_residues MIEKVEEKSKIIKTSKEYKRTIIEEKDKEWTKKLNDILSRSSFSNDELDKIKALIPKEILTNENVGEVVTEDGYAKPEYD EVFKSLFTLNNEYDLLVNFINDILKDAPYANRNIKPFTQIKRIIRVETDPTINYIGEKRPRLDILAEDEENNHINIEMQR AFENDYLERAEYYLSRVHGRKLEEGKEYKEIGKTIGIHILNHVKYNHIEDYVNCLRLTMDGHPDIYSSKTALYFIELPKI HKSDYIVNRIMLWGKLISNPSNLDVRVIAKNDSIIKKALDRLKELGSNEEYLLNLKRGAYIMNKSRNFKEEIERETAIRV AKEKDYKIIIMLKKNGFKLDDILNKFNDFDLSEDEIKEVYENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42900; Mature: 42900
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKVEEKSKIIKTSKEYKRTIIEEKDKEWTKKLNDILSRSSFSNDELDKIKALIPKEIL CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH TNENVGEVVTEDGYAKPEYDEVFKSLFTLNNEYDLLVNFINDILKDAPYANRNIKPFTQI CCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH KRIIRVETDPTINYIGEKRPRLDILAEDEENNHINIEMQRAFENDYLERAEYYLSRVHGR HHHHHCCCCCCHHHCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC KLEEGKEYKEIGKTIGIHILNHVKYNHIEDYVNCLRLTMDGHPDIYSSKTALYFIELPKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC HKSDYIVNRIMLWGKLISNPSNLDVRVIAKNDSIIKKALDRLKELGSNEEYLLNLKRGAY CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCEE IMNKSRNFKEEIERETAIRVAKEKDYKIIIMLKKNGFKLDDILNKFNDFDLSEDEIKEVY EECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHH ENN CCC >Mature Secondary Structure MIEKVEEKSKIIKTSKEYKRTIIEEKDKEWTKKLNDILSRSSFSNDELDKIKALIPKEIL CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH TNENVGEVVTEDGYAKPEYDEVFKSLFTLNNEYDLLVNFINDILKDAPYANRNIKPFTQI CCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH KRIIRVETDPTINYIGEKRPRLDILAEDEENNHINIEMQRAFENDYLERAEYYLSRVHGR HHHHHCCCCCCHHHCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC KLEEGKEYKEIGKTIGIHILNHVKYNHIEDYVNCLRLTMDGHPDIYSSKTALYFIELPKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC HKSDYIVNRIMLWGKLISNPSNLDVRVIAKNDSIIKKALDRLKELGSNEEYLLNLKRGAY CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCEE IMNKSRNFKEEIERETAIRVAKEKDYKIIIMLKKNGFKLDDILNKFNDFDLSEDEIKEVY EECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHH ENN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA