Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698138

Identifier: 126698138

GI number: 126698138

Start: 665986

End: 666549

Strand: Direct

Name: 126698138

Synonym: CD0559

Alternate gene names: NA

Gene position: 665986-666549 (Clockwise)

Preceding gene: 126698137

Following gene: 126698139

Centisome position: 15.52

GC content: 30.5

Gene sequence:

>564_bases
ATGAAAGAGGTATTGGTATTACGAGATTTGGAGTGCATAAAGGCTATTGCGCATCCACGTAGAATAGATATTCTAAAAGC
ATTTGACAAATCGCCATTGTCAGCAAAACAATTATCTCAATTATTGGAAGAACCTCATGCAAAAATAAACTACCATATAA
AAATGTTATACAAAGTTGGTATTTTAGAATTAGTTGAGGAAAAAATAAAGTCGGGGATTGTGGAAAAGTACTATTATCCA
AGTGCAAAAAATGTGGTTATAGGGAATAGGATACTTAATTTTTCTTTAGACAATGGGGAAGAAAAAGAAGAATTGTACAT
ATCAAAATTTGAAAATATGAGTGAAGTTTTTTATAAGGCAGCAGAGGAAGATGTTTTAGAAAATGAAAATATAGTTGATT
ATCATGATATTTCTCTTACTCATGATGAATTAGTTGAACTTAGTGACACTATGAAGTCAAAGATAGATGAAATTTTAAAT
AAAAGACAACACAATGTTGAAGGTTCTAAGTATGATATAGCTATGGTTATAGTTCCTACTCTTGAGGAGGAATGTCCTAG
TTAG

Upstream 100 bases:

>100_bases
TAAAATATTAAGAAAGGATTTTTTTGACAACAACATATAATTTAATATATAATTAAATTGTAAAGAAATATGAATTAAAT
AAATTTTTTAGGAGGGGTCA

Downstream 100 bases:

>100_bases
AGAATTAATTATGGATTAATTAAAGATATAATATTAGAGATTGAACATCAAAATTTACTTAATAATCAAAAAATAGTTTT
TGGTATGGGTAAAACAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family; Transcriptional Regulatory Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKEVLVLRDLECIKAIAHPRRIDILKAFDKSPLSAKQLSQLLEEPHAKINYHIKMLYKVGILELVEEKIKSGIVEKYYYP
SAKNVVIGNRILNFSLDNGEEKEELYISKFENMSEVFYKAAEEDVLENENIVDYHDISLTHDELVELSDTMKSKIDEILN
KRQHNVEGSKYDIAMVIVPTLEEECPS

Sequences:

>Translated_187_residues
MKEVLVLRDLECIKAIAHPRRIDILKAFDKSPLSAKQLSQLLEEPHAKINYHIKMLYKVGILELVEEKIKSGIVEKYYYP
SAKNVVIGNRILNFSLDNGEEKEELYISKFENMSEVFYKAAEEDVLENENIVDYHDISLTHDELVELSDTMKSKIDEILN
KRQHNVEGSKYDIAMVIVPTLEEECPS
>Mature_187_residues
MKEVLVLRDLECIKAIAHPRRIDILKAFDKSPLSAKQLSQLLEEPHAKINYHIKMLYKVGILELVEEKIKSGIVEKYYYP
SAKNVVIGNRILNFSLDNGEEKEELYISKFENMSEVFYKAAEEDVLENENIVDYHDISLTHDELVELSDTMKSKIDEILN
KRQHNVEGSKYDIAMVIVPTLEEECPS

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21627; Mature: 21627

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVLVLRDLECIKAIAHPRRIDILKAFDKSPLSAKQLSQLLEEPHAKINYHIKMLYKVG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
ILELVEEKIKSGIVEKYYYPSAKNVVIGNRILNFSLDNGEEKEELYISKFENMSEVFYKA
HHHHHHHHHHHCHHHHHCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AEEDVLENENIVDYHDISLTHDELVELSDTMKSKIDEILNKRQHNVEGSKYDIAMVIVPT
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEC
LEEECPS
CCCCCCC
>Mature Secondary Structure
MKEVLVLRDLECIKAIAHPRRIDILKAFDKSPLSAKQLSQLLEEPHAKINYHIKMLYKVG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
ILELVEEKIKSGIVEKYYYPSAKNVVIGNRILNFSLDNGEEKEELYISKFENMSEVFYKA
HHHHHHHHHHHCHHHHHCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AEEDVLENENIVDYHDISLTHDELVELSDTMKSKIDEILNKRQHNVEGSKYDIAMVIVPT
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEC
LEEECPS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA