Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698124

Identifier: 126698124

GI number: 126698124

Start: 650099

End: 650710

Strand: Direct

Name: 126698124

Synonym: CD0545

Alternate gene names: NA

Gene position: 650099-650710 (Clockwise)

Preceding gene: 126698123

Following gene: 126698125

Centisome position: 15.15

GC content: 28.27

Gene sequence:

>612_bases
ATGAAAATGGTAAAAAAGTTAATATTATCTACGATTATGGCTCTAGTTTTAGTTCTAACTATAGGGTGTTCTAATGCAGA
AGAAAAAGTAAAGTCGAATTTTGAAGCTAATTTAGCTGCATTAGAAATGTATAAGTATGATGAAAAAGGAATTTCTGATG
CATTAACAGAAGCTGAATATAAACAGATTCAAACTTATAACAGCAAGGACAAGGTTTCAATGATTGCTCAATTGACACCT
CTTTATGGTAAAGAAAATGCTGAAAAGATATACGAAACAATTGTTAAATTAATTCAAGGTGTTGAAAAGACAGTAACAGT
GGAATCTTCTAGTAAGGATAAGATAACTTTGAAAGTTGTAAGTAAAGCTTTAGATACTAGTAAAGTAATGAGTGAAGCGA
ACACTTTAGTAAAATCTTATGTAACTGATGAAAAGAATTACGATAAAAAAGAAAAAGAAGTTCAAGATGATATGACAAAA
ATGATTATAGACCTTTACAATAAGAAACCAACTAAGGAAGTTACAACTATGATTACATATACTAAAAAAGATGGTAAATG
GCAACCACCTAGTAATATACAAAAGTTATGTGAAGGAATATATACAATTTAA

Upstream 100 bases:

>100_bases
AAGTGGTAAAATATTCAAAATAATTCTATAGTTAGACAAATTTATGTTATAATGTTGATAAATAAATTTTTTATTATTTT
AATTGAGGGAGGATGTTTGT

Downstream 100 bases:

>100_bases
TTTATTTTAAAGACACAAAACTATCTTTTAAGCATATAATAAAATGTTTGGAAGATAGTTTATTTTATTTTCAAAGTATA
AATTATATTTTATAAATGAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKMVKKLILSTIMALVLVLTIGCSNAEEKVKSNFEANLAALEMYKYDEKGISDALTEAEYKQIQTYNSKDKVSMIAQLTP
LYGKENAEKIYETIVKLIQGVEKTVTVESSSKDKITLKVVSKALDTSKVMSEANTLVKSYVTDEKNYDKKEKEVQDDMTK
MIIDLYNKKPTKEVTTMITYTKKDGKWQPPSNIQKLCEGIYTI

Sequences:

>Translated_203_residues
MKMVKKLILSTIMALVLVLTIGCSNAEEKVKSNFEANLAALEMYKYDEKGISDALTEAEYKQIQTYNSKDKVSMIAQLTP
LYGKENAEKIYETIVKLIQGVEKTVTVESSSKDKITLKVVSKALDTSKVMSEANTLVKSYVTDEKNYDKKEKEVQDDMTK
MIIDLYNKKPTKEVTTMITYTKKDGKWQPPSNIQKLCEGIYTI
>Mature_203_residues
MKMVKKLILSTIMALVLVLTIGCSNAEEKVKSNFEANLAALEMYKYDEKGISDALTEAEYKQIQTYNSKDKVSMIAQLTP
LYGKENAEKIYETIVKLIQGVEKTVTVESSSKDKITLKVVSKALDTSKVMSEANTLVKSYVTDEKNYDKKEKEVQDDMTK
MIIDLYNKKPTKEVTTMITYTKKDGKWQPPSNIQKLCEGIYTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23009; Mature: 23009

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMVKKLILSTIMALVLVLTIGCSNAEEKVKSNFEANLAALEMYKYDEKGISDALTEAEY
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHH
KQIQTYNSKDKVSMIAQLTPLYGKENAEKIYETIVKLIQGVEKTVTVESSSKDKITLKVV
HHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHEEEECCCCCHHHHHHH
SKALDTSKVMSEANTLVKSYVTDEKNYDKKEKEVQDDMTKMIIDLYNKKPTKEVTTMITY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHE
TKKDGKWQPPSNIQKLCEGIYTI
ECCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKMVKKLILSTIMALVLVLTIGCSNAEEKVKSNFEANLAALEMYKYDEKGISDALTEAEY
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHH
KQIQTYNSKDKVSMIAQLTPLYGKENAEKIYETIVKLIQGVEKTVTVESSSKDKITLKVV
HHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHEEEECCCCCHHHHHHH
SKALDTSKVMSEANTLVKSYVTDEKNYDKKEKEVQDDMTKMIIDLYNKKPTKEVTTMITY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHE
TKKDGKWQPPSNIQKLCEGIYTI
ECCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA