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The map label for this gene is ocd2 [H]

Identifier: 126698123

GI number: 126698123

Start: 649018

End: 650007

Strand: Direct

Name: ocd2 [H]

Synonym: CD0544

Alternate gene names: 126698123

Gene position: 649018-650007 (Clockwise)

Preceding gene: 126698122

Following gene: 126698124

Centisome position: 15.13

GC content: 33.74

Gene sequence:

>990_bases
ATGCTACTTTTAAAAAAAGACGACATAAAAAAAGTATTTACAATGAGAGATGCAATTGAAGCTGATAAGGAAGCTTTTAG
AATTTATTGTGAAGGAAAGAGTGTAAATCCTTTGAGAACCAATATATCTGTTCCAAGTCAAGATGCTAGTATGTTATTTA
TGCCAGGATATGTAGAAGAATTAGGCTGTGGGGGAATAAAAATTGTATCTGTATTTCCTAAAAATGCTCAAAAAGGCAAA
CCAGTAATTCCAGCAACAGTACTATTATTAGATGGAGAAACTGGAGAAGTTAGTGCAGTATTGGATGGTACTTATGTAAC
TCAGATTCGTACTGGAGCAGCCTCTGGAGCAGCTATAGATGTATTGGCTAAAAAAGATTCTAAGATTGGAGCTTTGATAG
GTCTAGGAGGACAAGGTGAGCCACAACTTGAAGCCATGATAGAAGCTAGAAATTTGGATGAGGTAAGAGTTTTTAGTAGA
AACAAGGAAAGTAGAGAAAAATTTGCAGAAGAAATGAACTTAAAATTAAGTAAATATAATACTAAAATAGTTGCAGTTGA
ATCATCTGATGAAGCCATAGATAACGCAGATGTGATAGTTTTAGCTACTCCATCAAAACAACCAGTACTTAATGGAAACT
TAGTGAAAAAAGGAGCTTTAATAAGTGCAGTAGGTTCATATATGCCAGATATGCAAGAGTTGTGCCCAAACTGTTTAACT
AGAGCGTCTAAGATATTTTTTGAATCAACAGATGCAGTTTTATCTGAGTCAGGAGATATATTAATTCCATTAAAAGAAGG
TAAGATAAGTAAAGATGATTTTAGTGGTGATTTAGGAAATGTTATAAACGGAACTATTCCTGGAAGAGAAGATGATGATG
AGATAATTGTATTTAAAACTGTTGGGATAGGTGTACAAGATGTCGTAACAGCAAAAAGAATATACGATAAAGCAAAAGAA
AACGGTATTGGAATAGACTGGAAGTGGTAA

Upstream 100 bases:

>100_bases
ACCAGAGTATGTAGATTTATTTGATTTGAAATAGAAGATTAAATTAAATGTTATGCTATAATATTTAGCATAGAGACTTA
TTAAAATTGGGGGTATAAAA

Downstream 100 bases:

>100_bases
AATATTCAAAATAATTCTATAGTTAGACAAATTTATGTTATAATGTTGATAAATAAATTTTTTATTATTTTAATTGAGGG
AGGATGTTTGTATGAAAATG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEELGCGGIKIVSVFPKNAQKGK
PVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAIDVLAKKDSKIGALIGLGGQGEPQLEAMIEARNLDEVRVFSR
NKESREKFAEEMNLKLSKYNTKIVAVESSDEAIDNADVIVLATPSKQPVLNGNLVKKGALISAVGSYMPDMQELCPNCLT
RASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGNVINGTIPGREDDDEIIVFKTVGIGVQDVVTAKRIYDKAKE
NGIGIDWKW

Sequences:

>Translated_329_residues
MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEELGCGGIKIVSVFPKNAQKGK
PVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAIDVLAKKDSKIGALIGLGGQGEPQLEAMIEARNLDEVRVFSR
NKESREKFAEEMNLKLSKYNTKIVAVESSDEAIDNADVIVLATPSKQPVLNGNLVKKGALISAVGSYMPDMQELCPNCLT
RASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGNVINGTIPGREDDDEIIVFKTVGIGVQDVVTAKRIYDKAKE
NGIGIDWKW
>Mature_329_residues
MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEELGCGGIKIVSVFPKNAQKGK
PVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAIDVLAKKDSKIGALIGLGGQGEPQLEAMIEARNLDEVRVFSR
NKESREKFAEEMNLKLSKYNTKIVAVESSDEAIDNADVIVLATPSKQPVLNGNLVKKGALISAVGSYMPDMQELCPNCLT
RASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGNVINGTIPGREDDDEIIVFKTVGIGVQDVVTAKRIYDKAKE
NGIGIDWKW

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=287, Percent_Identity=33.4494773519164, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI62241008, Length=283, Percent_Identity=33.2155477031802, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24642678, Length=281, Percent_Identity=28.1138790035587, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35561; Mature: 35561

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEE
CEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEECCCHHHH
LGCGGIKIVSVFPKNAQKGKPVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAID
HCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCEEEEEEECCCCCCCEEE
VLAKKDSKIGALIGLGGQGEPQLEAMIEARNLDEVRVFSRNKESREKFAEEMNLKLSKYN
EEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHCCEEEECC
TKIVAVESSDEAIDNADVIVLATPSKQPVLNGNLVKKGALISAVGSYMPDMQELCPNCLT
EEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHH
RASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGNVINGTIPGREDDDEIIVFKT
HHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEE
VGIGVQDVVTAKRIYDKAKENGIGIDWKW
ECCCHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEE
CEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEECCCHHHH
LGCGGIKIVSVFPKNAQKGKPVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAID
HCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCEEEEEEECCCCCCCEEE
VLAKKDSKIGALIGLGGQGEPQLEAMIEARNLDEVRVFSRNKESREKFAEEMNLKLSKYN
EEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHCCEEEECC
TKIVAVESSDEAIDNADVIVLATPSKQPVLNGNLVKKGALISAVGSYMPDMQELCPNCLT
EEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHH
RASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGNVINGTIPGREDDDEIIVFKT
HHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEE
VGIGVQDVVTAKRIYDKAKENGIGIDWKW
ECCCHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]