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The map label for this gene is yobV [H]

Identifier: 126698110

GI number: 126698110

Start: 636501

End: 637412

Strand: Direct

Name: yobV [H]

Synonym: CD0531

Alternate gene names: 126698110

Gene position: 636501-637412 (Clockwise)

Preceding gene: 126698104

Following gene: 126698111

Centisome position: 14.84

GC content: 27.19

Gene sequence:

>912_bases
ATGAAAATAAATAGATTAACAGAAATAATAGTAATTCTATTAAATAAAAAATTAGTAACAGCTAAAGAGTTGGCAGATAG
ATTTGAAGTTTCTACAAGAACCATATATAGAGATATAGAAACTCTGTCTATGTCGGGAGTACCAGTATATATGACGAAAG
GCAAAGGAGGAGGGATATCTTTAATAGAAGAATATTCTATAGACAAGGCTATATTGTCAAAAAAAGATAAAGAGAGTTTA
ATAGTTGCACTGAAAACATTACAGGCGACTAAGTATCCAGAAATAAATTCAGTAGTAAATAAAATTGGCTCAATATTTGG
AGAGCAGAATTTTTCAAACTGGATTGAAATAGACTTTACTGAATGGGGAAGTAATTTTAATGAAGATGATAAATTTACAA
AAATAAAAGAAGCTATTTTAAGGCGTAATACTATAAATTTTAATTATGTAAATAGTTTGTCAAGCCAGACAAACAGAACT
GTCGAACCACTGAAGCTTATGTATAAGAGTAAGACTTGGTACTTGTATGGATTTTGTAAACTAAAAGATGATTTTAGGAT
ATTTAGAATTAGTAGGATAAGGAATTTATCTATAAAGGATGAAGTATTTTCAAGAAAGATAATAGAAGAAGTATGTTTGA
ATGATTCTAAAGTAATTAAGGAAAATACTATAACGTTGAAATTGAGGTTTAAAGAAAAGATGCTTTTTAGAGTATTTGAT
GATTTTAATAAGGATTTAATAACTAAAAATGAAGATGATACATATGATGTAATTACAGAATTTCCTATTGGTGAATGGAT
TTATGGATATATTTTATCATTTGGTGACAATGTTGAAGTACTTGAACCTAAAGATGTTAGGGATAATGTAATAACTAGAC
TAAGGGAGTTGTCTAAAATTTATTCATTATAA

Upstream 100 bases:

>100_bases
TAAAAATAATTTAGATAAGATTCTAAGATTTTATTTATTTAAAAATTAGTATGATTAATTTAGATTAAATAAATTTAATA
ATTTTAGTAGGTGGTAATGA

Downstream 100 bases:

>100_bases
TATAATGCTAGATTAAAGATTTTATTAAATATATAATATCTTGCATTTAGTATATAATATCTCACTGAGTTTAATTATAT
TAAAAATATGACATAAAGGT

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKINRLTEIIVILLNKKLVTAKELADRFEVSTRTIYRDIETLSMSGVPVYMTKGKGGGISLIEEYSIDKAILSKKDKESL
IVALKTLQATKYPEINSVVNKIGSIFGEQNFSNWIEIDFTEWGSNFNEDDKFTKIKEAILRRNTINFNYVNSLSSQTNRT
VEPLKLMYKSKTWYLYGFCKLKDDFRIFRISRIRNLSIKDEVFSRKIIEEVCLNDSKVIKENTITLKLRFKEKMLFRVFD
DFNKDLITKNEDDTYDVITEFPIGEWIYGYILSFGDNVEVLEPKDVRDNVITRLRELSKIYSL

Sequences:

>Translated_303_residues
MKINRLTEIIVILLNKKLVTAKELADRFEVSTRTIYRDIETLSMSGVPVYMTKGKGGGISLIEEYSIDKAILSKKDKESL
IVALKTLQATKYPEINSVVNKIGSIFGEQNFSNWIEIDFTEWGSNFNEDDKFTKIKEAILRRNTINFNYVNSLSSQTNRT
VEPLKLMYKSKTWYLYGFCKLKDDFRIFRISRIRNLSIKDEVFSRKIIEEVCLNDSKVIKENTITLKLRFKEKMLFRVFD
DFNKDLITKNEDDTYDVITEFPIGEWIYGYILSFGDNVEVLEPKDVRDNVITRLRELSKIYSL
>Mature_303_residues
MKINRLTEIIVILLNKKLVTAKELADRFEVSTRTIYRDIETLSMSGVPVYMTKGKGGGISLIEEYSIDKAILSKKDKESL
IVALKTLQATKYPEINSVVNKIGSIFGEQNFSNWIEIDFTEWGSNFNEDDKFTKIKEAILRRNTINFNYVNSLSSQTNRT
VEPLKLMYKSKTWYLYGFCKLKDDFRIFRISRIRNLSIKDEVFSRKIIEEVCLNDSKVIKENTITLKLRFKEKMLFRVFD
DFNKDLITKNEDDTYDVITEFPIGEWIYGYILSFGDNVEVLEPKDVRDNVITRLRELSKIYSL

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35472; Mature: 35472

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRLTEIIVILLNKKLVTAKELADRFEVSTRTIYRDIETLSMSGVPVYMTKGKGGGIS
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
LIEEYSIDKAILSKKDKESLIVALKTLQATKYPEINSVVNKIGSIFGEQNFSNWIEIDFT
HHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEH
EWGSNFNEDDKFTKIKEAILRRNTINFNYVNSLSSQTNRTVEPLKLMYKSKTWYLYGFCK
HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEE
LKDDFRIFRISRIRNLSIKDEVFSRKIIEEVCLNDSKVIKENTITLKLRFKEKMLFRVFD
ECCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEEHHHHHHHHHHH
DFNKDLITKNEDDTYDVITEFPIGEWIYGYILSFGDNVEVLEPKDVRDNVITRLRELSKI
HCCHHHCCCCCCCCCHHEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
YSL
HCC
>Mature Secondary Structure
MKINRLTEIIVILLNKKLVTAKELADRFEVSTRTIYRDIETLSMSGVPVYMTKGKGGGIS
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
LIEEYSIDKAILSKKDKESLIVALKTLQATKYPEINSVVNKIGSIFGEQNFSNWIEIDFT
HHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEH
EWGSNFNEDDKFTKIKEAILRRNTINFNYVNSLSSQTNRTVEPLKLMYKSKTWYLYGFCK
HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEE
LKDDFRIFRISRIRNLSIKDEVFSRKIIEEVCLNDSKVIKENTITLKLRFKEKMLFRVFD
ECCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEEHHHHHHHHHHH
DFNKDLITKNEDDTYDVITEFPIGEWIYGYILSFGDNVEVLEPKDVRDNVITRLRELSKI
HCCHHHCCCCCCCCCHHEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
YSL
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]