| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is spaG
Identifier: 126698057
GI number: 126698057
Start: 568645
End: 569421
Strand: Direct
Name: spaG
Synonym: CD0480
Alternate gene names: NA
Gene position: 568645-569421 (Clockwise)
Preceding gene: 126698056
Following gene: 126698058
Centisome position: 13.25
GC content: 36.42
Gene sequence:
>777_bases ATGATAAAGCTATTATCATCAGAATGGCTTCGAGCAAAGAGGACAGCTGTCCAGTGGCTTACTCTTTTTATGCCTATTAT TTTTTCATTATGTGTGGTTTTTTATCTCACAACTAAATCTGGAAGTACACAAGAATTTGCTTTTGAAGGATTTTTTACAG TATGGACTGTATTCATCATTCCTATTGGAGTAGGTATTTTAGCAGGATTTATAGTGCAGGAGGAAGAGCTTGCTGGAAAT TTTAATGGTTTTTTATGTGTAGGTATTTCTCGTGTTAGATTATATCTGGGAAAATTTCTTTTTCTTCTGTTTTGCCTAAC TATATGCACATTTATTGCTACGTTGATACTTTGCATAGGAATGAGTATTGCAGTGCCATCTGGAGCAACAATATGGTTAT TCCTGTCAGCAGCAGGACTTGTGGTGATTGGGACACTTCCACTATTAGCTATTCATCTTTGGGTGAGTTTTGCATGGGGT ATGGGTGCATCTATTGGTATTAGTATCGGTGGAATTTTGATGGCAGCAATACTTGGATTAACTAGCGTTGGTGAAAAAGT ATGGGCATTTGTTCCATGGACATGGCCAGTAAAACTAGGTATGCTTCCAGGAATTTATTTTATTAAAGAAGCTGGAACTA TTTCAACTGAGGCATTTTACTCTAAAGTGATGCAAACAGCTAGTATAGAGCTTATAGTAGTAGCAATAGGTTTGATTATA TTCTTGATAGGAGGCGTTATTTGGTTTAAAATGTGGGAGGGAAGGAAAAGTTATTAG
Upstream 100 bases:
>100_bases TGAATACTTCAGTGATTCCTATTGGGATTGTTGTTTCTTTGGTTGTGTTTATAGTATTAACAGCACTTACTGCAGCTTGG TTCAATAGGAGGGATGACAA
Downstream 100 bases:
>100_bases TAGACGAATATTGTTTTAATACTGACCTTCCCATAAGAGAAAGGTGGTGTTATATTGAGTAAAATATTGATTATTGATGA TGAAATGGACCTAGTAATGC
Product: lantibiotic ABC transporter permease
Products: NA
Alternate protein names: Lantibiotic ABC Transporter Permease Protein; Lantibiotic ABC Transporter Permease; Subtilin ABC Transporter Permease
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIKLLSSEWLRAKRTAVQWLTLFMPIIFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFIIPIGVGILAGFIVQEEELAGN FNGFLCVGISRVRLYLGKFLFLLFCLTICTFIATLILCIGMSIAVPSGATIWLFLSAAGLVVIGTLPLLAIHLWVSFAWG MGASIGISIGGILMAAILGLTSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAIGLII FLIGGVIWFKMWEGRKSY
Sequences:
>Translated_258_residues MIKLLSSEWLRAKRTAVQWLTLFMPIIFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFIIPIGVGILAGFIVQEEELAGN FNGFLCVGISRVRLYLGKFLFLLFCLTICTFIATLILCIGMSIAVPSGATIWLFLSAAGLVVIGTLPLLAIHLWVSFAWG MGASIGISIGGILMAAILGLTSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAIGLII FLIGGVIWFKMWEGRKSY >Mature_258_residues MIKLLSSEWLRAKRTAVQWLTLFMPIIFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFIIPIGVGILAGFIVQEEELAGN FNGFLCVGISRVRLYLGKFLFLLFCLTICTFIATLILCIGMSIAVPSGATIWLFLSAAGLVVIGTLPLLAIHLWVSFAWG MGASIGISIGGILMAAILGLTSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAIGLII FLIGGVIWFKMWEGRKSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28325; Mature: 28325
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLLSSEWLRAKRTAVQWLTLFMPIIFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH PIGVGILAGFIVQEEELAGNFNGFLCVGISRVRLYLGKFLFLLFCLTICTFIATLILCIG HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MSIAVPSGATIWLFLSAAGLVVIGTLPLLAIHLWVSFAWGMGASIGISIGGILMAAILGL CHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAIGLII HHCCCHHEEECCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLIGGVIWFKMWEGRKSY HHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIKLLSSEWLRAKRTAVQWLTLFMPIIFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH PIGVGILAGFIVQEEELAGNFNGFLCVGISRVRLYLGKFLFLLFCLTICTFIATLILCIG HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MSIAVPSGATIWLFLSAAGLVVIGTLPLLAIHLWVSFAWGMGASIGISIGGILMAAILGL CHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAIGLII HHCCCHHEEECCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLIGGVIWFKMWEGRKSY HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA