Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is spaE

Identifier: 126698056

GI number: 126698056

Start: 567878

End: 568648

Strand: Direct

Name: spaE

Synonym: CD0479

Alternate gene names: NA

Gene position: 567878-568648 (Clockwise)

Preceding gene: 126698055

Following gene: 126698057

Centisome position: 13.24

GC content: 36.45

Gene sequence:

>771_bases
ATGAATGCTTTACAATCAGAACTTTTAAAGTATAAAAGAACATTTATGGGTAAACTTATTGTTTTTTTCCCAGTGTCTTT
TGCAGCATATGCATTTATAATGCAATCAACACTCATGCAAAATCCATTATCTCAAACAACTTCTTGGGCGTGGCAAAGTC
TTTTAGCATTAATTTTTAACTGGTGGTCATTTTTATTTCTGCCTATTGGATTTGCATTGTTTGCTACTTTGGTAGCTTTC
CAGGAAAAAAAAGCTGGAAATTATCGTGCTTTACGTACACACAATGTGTCTCCTATGACACTTTGGATTAATAAAGTTAT
AGCTATGGCAGTCTACAGTTTTATTTCAACGCTAGTTTTAATAGTCGTAACAATTATAACTGGTTTAATATTGAAAGCTG
GTCCAGTTCCTTTTGGACAGATTATAGGGGCAAGTATTGTATGCTGGGTTGTTTCTCTTGCTATACTTCCACTTCAGCTA
TGGCTAGCTACATGGAAAGGTATGTTCCTAAGTATGGGAGTTGGAGCTTTAGGTATGATATTTGGTGTCCTTGCTGCGAC
AAAACCATTTTGGATTGCAGTACCTTGGAGTTGGGCAGTTAGAATGGTATGCCCAATCATCAACATACATCCTAACGGTA
CTATATTAGAAGCTGGAGACCCACTTTTGAATACTTCAGTGATTCCTATTGGGATTGTTGTTTCTTTGGTTGTGTTTATA
GTATTAACAGCACTTACTGCAGCTTGGTTCAATAGGAGGGATGACAAATGA

Upstream 100 bases:

>100_bases
TTATAAATGGAGGACGACTATTATTTCAAGGAATGCCTGACCCTAATGAAAATCTAGAAGAATTTTTTACAGATGTTATT
CTTAAAGGAGGACAAAACAG

Downstream 100 bases:

>100_bases
TAAAGCTATTATCATCAGAATGGCTTCGAGCAAAGAGGACAGCTGTCCAGTGGCTTACTCTTTTTATGCCTATTATTTTT
TCATTATGTGTGGTTTTTTA

Product: lantibiotic ABC transporter permease

Products: NA

Alternate protein names: Bacteriocin ABC Transporter Permease Protein Subunit; Lantibiotic Permease Protein SpaE/MutE; Permease; Lantibiotic ABC Transporter Permease Protein; Transporter Protein; Bacteriocin ABC Transporter Permease Subunit; Bacteriocin Abc Transporter Permease Subunit; Antibiotic ABC Transporter; Lantibiotic PermeaE/MutE; Mutacin ABC Transporter Protein MutE; LOW QUALITY PROTEIN Lantibiotic ABC Transporter; Subtilin ABC Transporter Permease; Antibiotic Permease Protein SpaE/MutE

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNALQSELLKYKRTFMGKLIVFFPVSFAAYAFIMQSTLMQNPLSQTTSWAWQSLLALIFNWWSFLFLPIGFALFATLVAF
QEKKAGNYRALRTHNVSPMTLWINKVIAMAVYSFISTLVLIVVTIITGLILKAGPVPFGQIIGASIVCWVVSLAILPLQL
WLATWKGMFLSMGVGALGMIFGVLAATKPFWIAVPWSWAVRMVCPIINIHPNGTILEAGDPLLNTSVIPIGIVVSLVVFI
VLTALTAAWFNRRDDK

Sequences:

>Translated_256_residues
MNALQSELLKYKRTFMGKLIVFFPVSFAAYAFIMQSTLMQNPLSQTTSWAWQSLLALIFNWWSFLFLPIGFALFATLVAF
QEKKAGNYRALRTHNVSPMTLWINKVIAMAVYSFISTLVLIVVTIITGLILKAGPVPFGQIIGASIVCWVVSLAILPLQL
WLATWKGMFLSMGVGALGMIFGVLAATKPFWIAVPWSWAVRMVCPIINIHPNGTILEAGDPLLNTSVIPIGIVVSLVVFI
VLTALTAAWFNRRDDK
>Mature_256_residues
MNALQSELLKYKRTFMGKLIVFFPVSFAAYAFIMQSTLMQNPLSQTTSWAWQSLLALIFNWWSFLFLPIGFALFATLVAF
QEKKAGNYRALRTHNVSPMTLWINKVIAMAVYSFISTLVLIVVTIITGLILKAGPVPFGQIIGASIVCWVVSLAILPLQL
WLATWKGMFLSMGVGALGMIFGVLAATKPFWIAVPWSWAVRMVCPIINIHPNGTILEAGDPLLNTSVIPIGIVVSLVVFI
VLTALTAAWFNRRDDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28385; Mature: 28385

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALQSELLKYKRTFMGKLIVFFPVSFAAYAFIMQSTLMQNPLSQTTSWAWQSLLALIFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
WWSFLFLPIGFALFATLVAFQEKKAGNYRALRTHNVSPMTLWINKVIAMAVYSFISTLVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IVVTIITGLILKAGPVPFGQIIGASIVCWVVSLAILPLQLWLATWKGMFLSMGVGALGMI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVLAATKPFWIAVPWSWAVRMVCPIINIHPNGTILEAGDPLLNTSVIPIGIVVSLVVFI
HHHHHCCCCEEEEECHHHHHHHHHHHHEECCCCCEEECCCCHHCCCHHHHHHHHHHHHHH
VLTALTAAWFNRRDDK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNALQSELLKYKRTFMGKLIVFFPVSFAAYAFIMQSTLMQNPLSQTTSWAWQSLLALIFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
WWSFLFLPIGFALFATLVAFQEKKAGNYRALRTHNVSPMTLWINKVIAMAVYSFISTLVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IVVTIITGLILKAGPVPFGQIIGASIVCWVVSLAILPLQLWLATWKGMFLSMGVGALGMI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVLAATKPFWIAVPWSWAVRMVCPIINIHPNGTILEAGDPLLNTSVIPIGIVVSLVVFI
HHHHHCCCCEEEEECHHHHHHHHHHHHEECCCCCEEECCCCHHCCCHHHHHHHHHHHHHH
VLTALTAAWFNRRDDK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA