| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is oraS
Identifier: 126698019
GI number: 126698019
Start: 528966
End: 529340
Strand: Direct
Name: oraS
Synonym: CD0445
Alternate gene names: NA
Gene position: 528966-529340 (Clockwise)
Preceding gene: 126698018
Following gene: 126698020
Centisome position: 12.33
GC content: 33.33
Gene sequence:
>375_bases ATGAAAAAAAGAGAGGATGATTTTGAAGTTAGAAGAAAACATCTTCAAGAACTGAGTGATGATGAGTTAAAAGAAAGGTT TTGGAGTTTAGCTACCCAGATAGTAGAACCAATGATAGAACTTGGTAAAAAGAATACAACACCATCAATAGAAAGGTCTG TCTTGTTGAGAATGGGATTTTCTTCTCTTGAAGTAAAACCTATTTTAGAAGGGGTTATGGAAAGAGGTCTTATAGGTAAA GGAGCAGGGCATGTAGTTTATAAATTGGCTAAATCTAAAAATATAACGGTTAGAGAAGCAGGTTTGTTATTAGTTAAGGG TGAATATTGGGATGAAGTTACATGTTTATTTAGAGAAGGGGTAGAATCATGTTAA
Upstream 100 bases:
>100_bases TTGATGTATTAAATAATTTATAGTAATTATTGTTTTTTAATTTAATATAAAATAAAAATTCAGAAAATTCGATTAAATCG ATACGGATGGAGGAATGTTC
Downstream 100 bases:
>100_bases AGGAAAATAAAAAATTGGATATAGACTATATATTAAAAGATTTGGATAAATATAAACCAAAACGAAGAGGTTGGGTTTGG AGAGAACACTTGGAAAATCT
Product: D-ornithine aminomutase S component
Products: NA
Alternate protein names: D-Ornithine 4 5-Aminomutase S Subunit
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKKREDDFEVRRKHLQELSDDELKERFWSLATQIVEPMIELGKKNTTPSIERSVLLRMGFSSLEVKPILEGVMERGLIGK GAGHVVYKLAKSKNITVREAGLLLVKGEYWDEVTCLFREGVESC
Sequences:
>Translated_124_residues MKKREDDFEVRRKHLQELSDDELKERFWSLATQIVEPMIELGKKNTTPSIERSVLLRMGFSSLEVKPILEGVMERGLIGK GAGHVVYKLAKSKNITVREAGLLLVKGEYWDEVTCLFREGVESC >Mature_124_residues MKKREDDFEVRRKHLQELSDDELKERFWSLATQIVEPMIELGKKNTTPSIERSVLLRMGFSSLEVKPILEGVMERGLIGK GAGHVVYKLAKSKNITVREAGLLLVKGEYWDEVTCLFREGVESC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14196; Mature: 14196
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKREDDFEVRRKHLQELSDDELKERFWSLATQIVEPMIELGKKNTTPSIERSVLLRMGF CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC SSLEVKPILEGVMERGLIGKGAGHVVYKLAKSKNITVREAGLLLVKGEYWDEVTCLFREG CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHHHH VESC HCCC >Mature Secondary Structure MKKREDDFEVRRKHLQELSDDELKERFWSLATQIVEPMIELGKKNTTPSIERSVLLRMGF CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC SSLEVKPILEGVMERGLIGKGAGHVVYKLAKSKNITVREAGLLLVKGEYWDEVTCLFREG CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHHHH VESC HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA