The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698000

Identifier: 126698000

GI number: 126698000

Start: 509017

End: 509619

Strand: Direct

Name: 126698000

Synonym: CD0429

Alternate gene names: NA

Gene position: 509017-509619 (Clockwise)

Preceding gene: 126697999

Following gene: 126698001

Centisome position: 11.86

GC content: 31.84

Gene sequence:

>603_bases
ATGTCAGAAAAAAAATTAACAGTAAGAGATATTGTAACAGTTGCAATTATGATAGCATTATTTTTTGCTATTTCGATTGT
TATTGGTATGGGGACAGTTACTATGCCGATTTTATATTTGTATGGTACGGCAGGAATTGAAATGTTTATAGGAGCAATAT
TTTATCTTGTTGCAGCAAATAGAGTCAATAAGCATGGACTACTATTTATTTGGATTTTAATTTATGGTTTGATAACAGCA
GCGATGGGATATGTGTTTATGCTTCCATATTTTATCGGATTAGCAATTATATGTGAACTTACAATGATTGGAAAGAATAC
TTATAGAAATCCAATTAGAAACATGATTGGCTGGTGTACCTATGCAATAGGAATGTTTCTTGGTATAGGGGTACCTTGTT
GGATTGCATGGGAAAGCTATCAAAAACAAGCACTTGCAGGTGGATTTGCGGATACTACATTAAAGCTTCAGTATGAAATG
GTATCTTCACCATCATTGATATTAGTAGGAGTAGCTGTAACAGTTATTTTATCTGCATTAGGAATTTTATTTGCACAAAA
AATATTGAAAAAACATTTTAAGAAGGCGGGTATATTAGATTAA

Upstream 100 bases:

>100_bases
ATACCTGTTCTTTGATAAAATATTTATCAAGGACAGGTATTTTTTGCTGGATTAATGCCAATAAGTTAGCCATGTCTAAT
ATTTTAAAAAGGAGAAGAAG

Downstream 100 bases:

>100_bases
TGCTATGGAACAGAAAATGAGAAAAATAGACAGTCTTGGTGGATTGGCTTGCTTACTCTTAACTCTGATTTCCTGTACAG
TATCTATTTTTACAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSEKKLTVRDIVTVAIMIALFFAISIVIGMGTVTMPILYLYGTAGIEMFIGAIFYLVAANRVNKHGLLFIWILIYGLITA
AMGYVFMLPYFIGLAIICELTMIGKNTYRNPIRNMIGWCTYAIGMFLGIGVPCWIAWESYQKQALAGGFADTTLKLQYEM
VSSPSLILVGVAVTVILSALGILFAQKILKKHFKKAGILD

Sequences:

>Translated_200_residues
MSEKKLTVRDIVTVAIMIALFFAISIVIGMGTVTMPILYLYGTAGIEMFIGAIFYLVAANRVNKHGLLFIWILIYGLITA
AMGYVFMLPYFIGLAIICELTMIGKNTYRNPIRNMIGWCTYAIGMFLGIGVPCWIAWESYQKQALAGGFADTTLKLQYEM
VSSPSLILVGVAVTVILSALGILFAQKILKKHFKKAGILD
>Mature_199_residues
SEKKLTVRDIVTVAIMIALFFAISIVIGMGTVTMPILYLYGTAGIEMFIGAIFYLVAANRVNKHGLLFIWILIYGLITAA
MGYVFMLPYFIGLAIICELTMIGKNTYRNPIRNMIGWCTYAIGMFLGIGVPCWIAWESYQKQALAGGFADTTLKLQYEMV
SSPSLILVGVAVTVILSALGILFAQKILKKHFKKAGILD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22051; Mature: 21920

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKKLTVRDIVTVAIMIALFFAISIVIGMGTVTMPILYLYGTAGIEMFIGAIFYLVAAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVNKHGLLFIWILIYGLITAAMGYVFMLPYFIGLAIICELTMIGKNTYRNPIRNMIGWCT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YAIGMFLGIGVPCWIAWESYQKQALAGGFADTTLKLQYEMVSSPSLILVGVAVTVILSAL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCHHHHHHHHHHHHHHH
GILFAQKILKKHFKKAGILD
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEKKLTVRDIVTVAIMIALFFAISIVIGMGTVTMPILYLYGTAGIEMFIGAIFYLVAAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVNKHGLLFIWILIYGLITAAMGYVFMLPYFIGLAIICELTMIGKNTYRNPIRNMIGWCT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YAIGMFLGIGVPCWIAWESYQKQALAGGFADTTLKLQYEMVSSPSLILVGVAVTVILSAL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCHHHHHHHHHHHHHHH
GILFAQKILKKHFKKAGILD
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA