Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698001

Identifier: 126698001

GI number: 126698001

Start: 509624

End: 510316

Strand: Direct

Name: 126698001

Synonym: CD0430

Alternate gene names: NA

Gene position: 509624-510316 (Clockwise)

Preceding gene: 126698000

Following gene: 126698002

Centisome position: 11.88

GC content: 32.32

Gene sequence:

>693_bases
ATGGAACAGAAAATGAGAAAAATAGACAGTCTTGGTGGATTGGCTTGCTTACTCTTAACTCTGATTTCCTGTACAGTATC
TATTTTTACAAAAGATTACTATATGCATGCTCTGTTTGTAGGATGGCTTTGTATCATTTTGATATACTTCGGCTTTTACA
AGCAGAGCTTGTTTTATGTTGTGATATATACTTTTACAGCATTTTGGCTTTTAGAAATGATTCCTAAAGGGATAGTTTTT
ATTTCGCCAATGCTATTAGGTATGGTGTACAAATTCATTGTTCCTATTATGGCTGCATATTTAACTTTTAAGATACCGTC
AGGGAAACTAATTGCAGTTTTTCAAAAGTGTGCTTTACCTCAGAATATCATCTTGATTTTGCTTGTAATCATTAGATTTA
TTCCAACAATATCAGGAGAATTTAAAACCATTAGAGAAGCAATGCGAGTTAGAGGTTTTACGGGAAGTGTAAAAAGAGTT
TTGTTCCACCCTTTACAAACAATGGAATATGCAGTCGTTCCTTTAATCTTTCGGTCAATAAAGGTTGGAGATGAATTGGC
GGCTGCATCTATTGTAAGAGGAATTGAAAATCCGGCTAAGAAATATAGTTATTATGAAACAAAATTTACAAAAGTAGATG
TCATTATTTTATTTATTAGTATTTGCTTAATGATAGCCTGCATTTTTAGATAG

Upstream 100 bases:

>100_bases
GGAGTAGCTGTAACAGTTATTTTATCTGCATTAGGAATTTTATTTGCACAAAAAATATTGAAAAAACATTTTAAGAAGGC
GGGTATATTAGATTAATGCT

Downstream 100 bases:

>100_bases
GAGGGAAGGTTATGGAAAATAAGATAAAAATTAATAACATAAACTTCTCCTATCGAGGAAATGACAAGCAATTAACCGAT
ATTAATTTAACTATTTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MEQKMRKIDSLGGLACLLLTLISCTVSIFTKDYYMHALFVGWLCIILIYFGFYKQSLFYVVIYTFTAFWLLEMIPKGIVF
ISPMLLGMVYKFIVPIMAAYLTFKIPSGKLIAVFQKCALPQNIILILLVIIRFIPTISGEFKTIREAMRVRGFTGSVKRV
LFHPLQTMEYAVVPLIFRSIKVGDELAAASIVRGIENPAKKYSYYETKFTKVDVIILFISICLMIACIFR

Sequences:

>Translated_230_residues
MEQKMRKIDSLGGLACLLLTLISCTVSIFTKDYYMHALFVGWLCIILIYFGFYKQSLFYVVIYTFTAFWLLEMIPKGIVF
ISPMLLGMVYKFIVPIMAAYLTFKIPSGKLIAVFQKCALPQNIILILLVIIRFIPTISGEFKTIREAMRVRGFTGSVKRV
LFHPLQTMEYAVVPLIFRSIKVGDELAAASIVRGIENPAKKYSYYETKFTKVDVIILFISICLMIACIFR
>Mature_230_residues
MEQKMRKIDSLGGLACLLLTLISCTVSIFTKDYYMHALFVGWLCIILIYFGFYKQSLFYVVIYTFTAFWLLEMIPKGIVF
ISPMLLGMVYKFIVPIMAAYLTFKIPSGKLIAVFQKCALPQNIILILLVIIRFIPTISGEFKTIREAMRVRGFTGSVKRV
LFHPLQTMEYAVVPLIFRSIKVGDELAAASIVRGIENPAKKYSYYETKFTKVDVIILFISICLMIACIFR

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26329; Mature: 26329

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKMRKIDSLGGLACLLLTLISCTVSIFTKDYYMHALFVGWLCIILIYFGFYKQSLFYV
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIYTFTAFWLLEMIPKGIVFISPMLLGMVYKFIVPIMAAYLTFKIPSGKLIAVFQKCALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
QNIILILLVIIRFIPTISGEFKTIREAMRVRGFTGSVKRVLFHPLQTMEYAVVPLIFRSI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGDELAAASIVRGIENPAKKYSYYETKFTKVDVIILFISICLMIACIFR
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQKMRKIDSLGGLACLLLTLISCTVSIFTKDYYMHALFVGWLCIILIYFGFYKQSLFYV
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIYTFTAFWLLEMIPKGIVFISPMLLGMVYKFIVPIMAAYLTFKIPSGKLIAVFQKCALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
QNIILILLVIIRFIPTISGEFKTIREAMRVRGFTGSVKRVLFHPLQTMEYAVVPLIFRSI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGDELAAASIVRGIENPAKKYSYYETKFTKVDVIILFISICLMIACIFR
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA