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The map label for this gene is 126697981

Identifier: 126697981

GI number: 126697981

Start: 483072

End: 484856

Strand: Direct

Name: 126697981

Synonym: CD0412

Alternate gene names: NA

Gene position: 483072-484856 (Clockwise)

Preceding gene: 126697980

Following gene: 126697982

Centisome position: 11.26

GC content: 35.74

Gene sequence:

>1785_bases
ATGATAGATAAGATATTAAAGGACATCAAAGGCTTATTTAAGGTGCAAGATAAGGTAAAGTTTCTAAAGCAGAACATTCC
CTATCTTGCATTTTTCTATATAGGCGATATCTTTTCACATCATGTAAGAGTCTATGTAGGTGGCGATATTATTGACAAAA
TCTTTCAAGGGATATTAGAGATTAACACTATGAACTTTCTTCCAAGCATTCATCCTACGGATATTTTAATGGGAGTGTTA
GTAGCTGTTTTAATCAAATTTATCGTATATACCAAAGGGAAAAATGCTAAAAAGTTTAGACAGGGGAAAGAGTATGGCTC
AGCAAGATGGGGAAATAAAAAAGACATCGAGCCGTACATGGATGAAAAGTTTCAAAACAATATCTTGCTCACTCAAACAG
AACGATTAACTATGAACGGTAGACCTGCTAATCCAAAGTATGCAAGAAATAAGAATGTACTTGTCATAGGAGGATCAGGA
AGTGGCAAGACTCGATTTTTTGTAAAACCAAACCTTATGCAAATGCACAGCAGCTATTGTGTAACCGATCCAAAAGGAAC
GATAGTTCTTGAGTGTGGTAAAATGCTTGAAGATAACGGATATGAGATAAAAATCTTAAATACCATCAACTTCAAAAAGA
GTATGAAATACAATCCATTTGCCTATATTCGTTCTGAGAAAGATATATTAAAACTTGTTCAGACCATCATTGCAAACACC
AAGGGCGAGGGAGAAAAAGCAGGTGAAGATTTTTGGGTAAAAGCCGAAAAACTCTACTATACAGCACTTATCGGCTATAT
CTTCTATGAAGCTCCAAGAGAAGAAAAGAACTTTGCAACCCTTCTTGATATGATAGACGCTTCGGAAGTCAGAGAAGATG
ATGAAACCTATATGAATCCGATTGATAGACTCTTTGAAGCATTGGAAAAGAAAGAGCCTACACACTTTGCGGTGAAGCAA
TATAAAAAGTACAAGCTGGCAGCCGGAAAAACTGCCAAATCGATTCTTATAAGCTGTGGTGCAAGGCTTGCTCCCTTTGA
TATTCAGGAACTTAGGGACTTGATGCAAGAAGATGAACTGGAGCTTGATACTCTTGGAGATAGAAAGACTGCCCTCTTTG
TTATTATCTCTGATACAGATGATACCTTTAACTTTGTAGTATCTATTATGTACTCTCAGTTATTTAATCTTTTATGTGAT
AAAGCGGATGATGTGTATGGCGGAAGATTACCTATCCATGTGAGATGCTTACTTGATGAATTTGCAAACATTGGTTTAAT
ACCTAAGTTTGAGAAGTTAATTGCAACAATCCGTTCCAGAGAAATATCAGCAAGCATCATACTTCAAGCACAATCTCAGC
TAAAGGTAATCTATAAGGATAATGCCGATACAATCGTAGGTAACTGTGATAGTACCTTGTTTCTTGGTGGCAAGGAAAAG
ACCACATTAAAGGAACTTTCTGAAACACTGGGAAAAGAAACGATAGATTTATATAACACATCGGAAACAAGGAGTAATCA
AAAGAGCTTTGGACTTAATTACCAAAAGACAGGTAAGGAGCTTATGAGCCAAGATGAGATTACTGTAATGGACGGTAGCA
AATGTATCTTTCAGCTTAGAGGTGTCAGACCTTTTCTTTCAGATAAATTCGATATTACAAAGCACAAGAATTATAAGCTA
CTTGAAGATTATGATAAGAAGAATGTGTTTAATATTGAGAGCTATATGAAGCGAAAAGGAAAAGCAAAATTAAATAGAGA
AACGGTTATTACAAGAATGCAGTAA

Upstream 100 bases:

>100_bases
GAAAAGAATCTATCCATAAGAATATTGAGAAGTTCAAGGAGATGGCTAAAAACTCTGTTTCCAAAGATAAAATCAAGAAT
AAACAAAAGGAGCAGAGCCT

Downstream 100 bases:

>100_bases
GTCTTAAAAAGATTTGCTGTTTTTTTATTCAAAATCAGGAGGCAAGATGATAAGGATCAGAAGTCCCACTAAGAAAAAAC
TAAATAGAAATAGTATCAGC

Product: conjugal transfer protein

Products: NA

Alternate protein names: TraG/TraD Family Protein; TraG Family Protein; TraG Protein; TRAG Protein; Conjugal Transfer Protein TraG; Conjugation Protein; Type IV Secretory Pathway VirD4 Component; Trag Family Protein; Type IV Secretion System; ATPase Involved In Conjugal Plasmid Transfer; Conjugal Transfer Protein TraD; Plasmid Transfer Factor TraK; Conjugal Transfer Protein; VirD4 Protein; TraK/VirD4-Like Protein; Ti-Type Conjugative Transfer System Protein TraG; Trag/Trad Family Protein; ORF Tau; Conjugal Plasmid Transfer ATPase; Related Plasmid Transfer Complex Protein TrsK/TraK; TraG Conjugal Transfer Transmembrane Protein; Protein TrsK; Component Of Type IV Secretion System; VirD4 Conjugative Transfer Protein; TrsK Protein; TraG/TraD Family; Conjugative Coupling Protein; Type IV Secretory Pathway VirD4 Components; Type IV Secretory Pathway VirD4 Protein-Like Protein; Conjugation-Related ATPase; Transport Secretion System IV VirD4 Protein; Agrobacteirum Virulence; Virulence VirD4-Like Protein; VirD4-Like Protein

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRVYVGGDIIDKIFQGILEINTMNFLPSIHPTDILMGVL
VAVLIKFIVYTKGKNAKKFRQGKEYGSARWGNKKDIEPYMDEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSG
SGKTRFFVKPNLMQMHSSYCVTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT
KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQ
YKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMQEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCD
KADDVYGGRLPIHVRCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKVIYKDNADTIVGNCDSTLFLGGKEK
TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLRGVRPFLSDKFDITKHKNYKL
LEDYDKKNVFNIESYMKRKGKAKLNRETVITRMQ

Sequences:

>Translated_594_residues
MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRVYVGGDIIDKIFQGILEINTMNFLPSIHPTDILMGVL
VAVLIKFIVYTKGKNAKKFRQGKEYGSARWGNKKDIEPYMDEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSG
SGKTRFFVKPNLMQMHSSYCVTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT
KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQ
YKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMQEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCD
KADDVYGGRLPIHVRCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKVIYKDNADTIVGNCDSTLFLGGKEK
TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLRGVRPFLSDKFDITKHKNYKL
LEDYDKKNVFNIESYMKRKGKAKLNRETVITRMQ
>Mature_594_residues
MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRVYVGGDIIDKIFQGILEINTMNFLPSIHPTDILMGVL
VAVLIKFIVYTKGKNAKKFRQGKEYGSARWGNKKDIEPYMDEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSG
SGKTRFFVKPNLMQMHSSYCVTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT
KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQ
YKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMQEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCD
KADDVYGGRLPIHVRCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKVIYKDNADTIVGNCDSTLFLGGKEK
TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLRGVRPFLSDKFDITKHKNYKL
LEDYDKKNVFNIESYMKRKGKAKLNRETVITRMQ

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68115; Mature: 68115

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRVYVGGDIIDKIFQGILE
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
INTMNFLPSIHPTDILMGVLVAVLIKFIVYTKGKNAKKFRQGKEYGSARWGNKKDIEPYM
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
DEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSGSGKTRFFVKPNLMQMHSSYC
HHHHCCCEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHCCEE
VTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT
EECCCCEEEEEECHHHCCCCCEEEEEEEECHHHCCCCCCEEEEECCHHHHHHHHHHHHCC
KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNP
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
IDRLFEALEKKEPTHFAVKQYKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMQEDEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
ELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPIHVRCLLDE
CHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHEEHHH
FANIGLIPKFEKLIATIRSREISASIILQAQSQLKVIYKDNADTIVGNCDSTLFLGGKEK
HHCCCCCCHHHHHHHHHHHCCCCHHHEEEECCCEEEEEECCCCEEEECCCCEEEECCCCH
TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLR
HHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEEC
GVRPFLSDKFDITKHKNYKLLEDYDKKNVFNIESYMKRKGKAKLNRETVITRMQ
CCCHHHCCCCCCCCCCCCCHHHHCCCCCEEEHHHHHHHCCCCCCCHHHHEEECC
>Mature Secondary Structure
MIDKILKDIKGLFKVQDKVKFLKQNIPYLAFFYIGDIFSHHVRVYVGGDIIDKIFQGILE
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
INTMNFLPSIHPTDILMGVLVAVLIKFIVYTKGKNAKKFRQGKEYGSARWGNKKDIEPYM
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
DEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSGSGKTRFFVKPNLMQMHSSYC
HHHHCCCEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHCCEE
VTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT
EECCCCEEEEEECHHHCCCCCEEEEEEEECHHHCCCCCCEEEEECCHHHHHHHHHHHHCC
KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNP
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
IDRLFEALEKKEPTHFAVKQYKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMQEDEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
ELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPIHVRCLLDE
CHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHEEHHH
FANIGLIPKFEKLIATIRSREISASIILQAQSQLKVIYKDNADTIVGNCDSTLFLGGKEK
HHCCCCCCHHHHHHHHHHHCCCCHHHEEEECCCEEEEEECCCCEEEECCCCEEEECCCCH
TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGSKCIFQLR
HHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEEC
GVRPFLSDKFDITKHKNYKLLEDYDKKNVFNIESYMKRKGKAKLNRETVITRMQ
CCCHHHCCCCCCCCCCCCCHHHHCCCCCEEEHHHHHHHCCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA