Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697980

Identifier: 126697980

GI number: 126697980

Start: 482590

End: 483075

Strand: Direct

Name: 126697980

Synonym: CD0411

Alternate gene names: NA

Gene position: 482590-483075 (Clockwise)

Preceding gene: 126697979

Following gene: 126697981

Centisome position: 11.25

GC content: 33.95

Gene sequence:

>486_bases
TTGATCAATGAAGAAATAGCAAGAAAAACGCTGAATATGGAAGTTAGAGCTGCTAAAGTAACAGGAAAGCTAATTCTGAA
CTTATTAAAGAAATTGATGAAAGAAGCAGAAAAACTTGGAGGACTTGAAAAGCTGGTTAATGCTAACGGAAATGAAGTAA
AGCTAAAAGATATGGTTAAAAAGGGACAGCTTGAAGAAATTCCGGTTGAAGAAGCAGAGCTTAAGGAACTGAAAAAAGAA
CTTAATCGGTATGGCGTAAAGTTTTCAGTGATGAAAGATAAGAAAATAGGTAAATACTCTGTATTCTTTCAAGCCAAAGA
TATGAAAGTGATGAATAAAGCCTTTAAGCATGCCCTGTCAGAATCGGAAAAGAAAACGGAAAGAAAAGAATCTATCCATA
AGAATATTGAGAAGTTCAAGGAGATGGCTAAAAACTCTGTTTCCAAAGATAAAATCAAGAATAAACAAAAGGAGCAGAGC
CTATGA

Upstream 100 bases:

>100_bases
GTATTCCTGTTATGGTTGTAGGAGAAGATTTTAGAAAGGTTATTCAAAAGGACAAACTGAATCGGAATAAGGACAGACTG
CTGAATGGAGGTGAGATAAG

Downstream 100 bases:

>100_bases
TAGATAAGATATTAAAGGACATCAAAGGCTTATTTAAGGTGCAAGATAAGGTAAAGTTTCTAAAGCAGAACATTCCCTAT
CTTGCATTTTTCTATATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MINEEIARKTLNMEVRAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVKKGQLEEIPVEEAELKELKKE
LNRYGVKFSVMKDKKIGKYSVFFQAKDMKVMNKAFKHALSESEKKTERKESIHKNIEKFKEMAKNSVSKDKIKNKQKEQS
L

Sequences:

>Translated_161_residues
MINEEIARKTLNMEVRAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVKKGQLEEIPVEEAELKELKKE
LNRYGVKFSVMKDKKIGKYSVFFQAKDMKVMNKAFKHALSESEKKTERKESIHKNIEKFKEMAKNSVSKDKIKNKQKEQS
L
>Mature_161_residues
MINEEIARKTLNMEVRAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVKKGQLEEIPVEEAELKELKKE
LNRYGVKFSVMKDKKIGKYSVFFQAKDMKVMNKAFKHALSESEKKTERKESIHKNIEKFKEMAKNSVSKDKIKNKQKEQS
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18596; Mature: 18596

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEEIARKTLNMEVRAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHHHH
KGQLEEIPVEEAELKELKKELNRYGVKFSVMKDKKIGKYSVFFQAKDMKVMNKAFKHALS
CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHH
ESEKKTERKESIHKNIEKFKEMAKNSVSKDKIKNKQKEQSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MINEEIARKTLNMEVRAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHHHH
KGQLEEIPVEEAELKELKKELNRYGVKFSVMKDKKIGKYSVFFQAKDMKVMNKAFKHALS
CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHH
ESEKKTERKESIHKNIEKFKEMAKNSVSKDKIKNKQKEQSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA