The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is bglF [H]

Identifier: 126697957

GI number: 126697957

Start: 457410

End: 459272

Strand: Direct

Name: bglF [H]

Synonym: CD0388

Alternate gene names: 126697957

Gene position: 457410-459272 (Clockwise)

Preceding gene: 126697924

Following gene: 126697958

Centisome position: 10.66

GC content: 31.29

Gene sequence:

>1863_bases
ATGAATTATAAAAAAACTGCCATTGACATTATTGAACAAGTTGGTGGTTCAAAAAATATTTTAGCTTTAGAACACTGTTC
AACTAGACTACGCTTTAAGTTGATTGATAGAAGTAAAGTCAATCAAGATGCTTTAAAAAAAGTACAAGGTGTTATGAGTA
TAGTTAATGGGGCACAATTTCAAGTTGTCATTGGAAATAGTGTTGTTGATGTGTATGATGAAATTTTAAAAGTTTGCCCT
TTAGATACAAATGATAGTACTGTAAAAACTGAAGAAAAAATAAACTTAGGAACAAGATTTATAGAATTTATTATTAATAT
TTTTCAACCACTGATTTTTGCTATTGCAGGAGCTGGTATTTTAAAATCACTGTTGATGTTATTAGCAATGTTTAATATTT
TAAAATCAGATTCTACTATATATACATTATTAGTTGCTATTTCAGATGCAACATTCTATTTCCTACCTCTTATGGTAGCT
GTAACTACTGCCAATGTATTGAAATGTAATCGTTTAGTAGCTATTGCCGCTGTAGGATACTTATTGCTTCCAGCAACAAC
AACTGCTTTAAGTGAAGGTGTCGAACTATTTGGATTTACAATTCCAAACATTGCCTATAATGCACAGGTTTTCCCGGCTA
TCTTATGTGTGTCTTTCTTGGCAACAATGGAGAAAATTTTTAACAAGTATTCACCAAAACCAATTCGAACTTTCTTTGTT
CCTATGATGTCTTTGGCAATTACTGTTCCAATTACTCTAACTATTTTAGGTCCTTTAGGATATAACGTTGGTACAATTTT
TACAACCATTATTTTATTCTTATATAACAAAATGGGATTCTTAGTTGTAGGATTACTTGCTGGTTTTCTTCCATTTATGG
TTGCAACAGGAATGCACAAAGCACTAATACCTTATTCAATTAATACAATTGGAAAGTTGGGTTATGAAGCTTTATATATG
ACATCTTCATTAGCCCACAATATTTCTGAAAGTGGTGCTTGTTTTGCAGTAGCCTTGCGAACAAAAGATGAAACATTAAA
ACAAACAGCATTATCTGCAGGAATTTCTGCCTTGATGGGAATTACAGAGCCAGCTTTATATGGTATTACTTTACAACATA
AAAGAGCAATGTTAGGTGTTGTATTCTCAAGTGCAATTTCTGGTACCTTTTTAGGATTATTTGCAGTAAAAGGATTTGTA
ATTGTTGGACCAGGGCTTGCCAGTATGAGTATGTTTATTGACCCAAACAATGGAAACAATTTGATTTTTGCAAGTATTGG
TTTTGTTATTGCAATATTAGGCTCGTTTATTATTACACTGATTATTTGGAAGGAAGATACAAATACAGTAGAGTCATCAA
TTGGAGATGTTGTTGAAGAAGAGCTAGAAGAAGAAAAAGAAGTAAATATCTTAGTAACTCCAGTAGAAGGAAAAGTAATA
GATTTAAGTAAGGTTAATGATGAACTATTTGCAAGTAAGACTTTGGGAGATGGAGTTGCAATTATACCGACCAATGGAAA
TTTATACGCACCTTGTGATTCAGAAGTTGTGATGTTATTTGAAACAAAACATGCAATTGGTTTAAGAACAAAAAATGGGG
CTGAGATTTTGATTCATATTGGAATAAATACTGTAAGTATGAATGGAGATGGATTTAAAACATTTGTTAAGACAAGCGAT
AATGTAAAAGAAGGAGATTTATTAATTCAATTTGATTTAGACAAAATCTCACATGCTAATTTAGATTCAACTGTTATGAT
TGTAAACAATAATGGAGCAGATTATGCTTATAAAGTGTTAAACCAGTCTTATGGCAATGTAAAAAAAGGAAGTATCTTGT
TTGATGTAAAGGGAGGAATATAA

Upstream 100 bases:

>100_bases
GAATATATTGCTTTGATTTTTCAAGGTGTTTATATAGGTTCTGCCTTTTTTGCATCTTGAATGGCCATTCATAAAAAATT
ATGGAGAAGGAGATTACAAG

Downstream 100 bases:

>100_bases
ATATGAGAAAGTTTCCAGAAGGATTTCTTTGGGGAGGAGCTACAGCTGCTAATCAATTTGAAGGTGGTTGGAATTTAGGT
GGTAAAGGGTGGTCTGTATC

Product: PTS system beta-glucoside-specific transporter subunit IIABC

Products: NA

Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCP
LDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA
VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV
PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYM
TSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFV
IVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI
DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSD
NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI

Sequences:

>Translated_620_residues
MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCP
LDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA
VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV
PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYM
TSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFV
IVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI
DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSD
NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI
>Mature_620_residues
MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCP
LDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA
VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV
PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYM
TSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFV
IVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI
DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSD
NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1263

COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790159, Length=628, Percent_Identity=33.9171974522293, Blast_Score=325, Evalue=5e-90,
Organism=Escherichia coli, GI48994906, Length=462, Percent_Identity=32.2510822510823, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI2367362, Length=413, Percent_Identity=28.3292978208232, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1786894, Length=148, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788769, Length=411, Percent_Identity=26.0340632603406, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788757, Length=103, Percent_Identity=39.8058252427184, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR018113
- InterPro:   IPR001127
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013
- InterPro:   IPR011297 [H]

Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 67064; Mature: 67064

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQF
CCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
QVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGI
EEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVAVTTANVLKCNRLVAIAAVGY
HHHHHHHHHHHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV
HHHCCHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHK
HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALIPYSINTIGKLGYEALYMTSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMG
EECCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
ITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFVIVGPGLASMSMFIDPNNGNN
CCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEEEEECCCCCE
LIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI
EEEEHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEE
DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHI
EHHHCCHHHHHHHCCCCCEEEEECCCCEECCCCCCEEEEEECCCCEEEEECCCCEEEEEE
GINTVSMNGDGFKTFVKTSDNVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVL
CCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHH
NQSYGNVKKGSILFDVKGGI
HCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQF
CCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
QVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGI
EEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVAVTTANVLKCNRLVAIAAVGY
HHHHHHHHHHHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV
HHHCCHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHK
HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALIPYSINTIGKLGYEALYMTSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMG
EECCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
ITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFVIVGPGLASMSMFIDPNNGNN
CCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEEEEECCCCCE
LIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI
EEEEHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEE
DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHI
EHHHCCHHHHHHHCCCCCEEEEECCCCEECCCCCCEEEEEECCCCEEEEECCCCEEEEEE
GINTVSMNGDGFKTFVKTSDNVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVL
CCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHH
NQSYGNVKKGSILFDVKGGI
HCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7883710; 7704263; 9384377; 8628237 [H]