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The map label for this gene is sorB [H]

Identifier: 126697859

GI number: 126697859

Start: 348061

End: 348549

Strand: Direct

Name: sorB [H]

Synonym: CD0287

Alternate gene names: 126697859

Gene position: 348061-348549 (Clockwise)

Preceding gene: 126697858

Following gene: 126697860

Centisome position: 8.11

GC content: 31.08

Gene sequence:

>489_bases
ATGGCAAAAATAACATTAGTAAGAGTAGACCACAGATTAATTCATGGGCAAGTTATAACAAAATGGGTAAAAATCGCTCA
AGCTCAAAAAATAATAATAGTTGATGACTTCTTAGGTCAAGATGAATTTATGGCTGACATATATAAAATGGCAGCACCAT
CAGGAGTAGAAGTAGTTATTTTAACAGCAGAAGATGCGGGACAAGCATTCCAAAACAACACTTTAGGAGATAAAAATATA
TTTATTCTATTTAAAAATGTTGATATGGCAAATAAGGCTTATAAAGCTGGACTTAAATATGAAAAGATTCAATTAGGAGG
TATTCCAAATGAAGCAGGAAAGAAAATGGTGTTTACAGCTGTTTCATTAGGAAATGAGGATGTAGAACAACTTAATGAAC
TTAATGAAAATGGGGTTGAAATAGTCCTACAAGTTATACCAGAGGAATCATCTATGACATATGAAAATGCGTTAAAGAAA
TTTAAATAA

Upstream 100 bases:

>100_bases
AATTACATACATTACCAGAAAGAATCGTCAAAAAAAATAATAACCTTTGTGTGGATTTAATTAAAGAATTTAAAAAAATA
TAAATTATGAGGTGAATATA

Downstream 100 bases:

>100_bases
AAAATATAAATTAGGAGGAATTATAAATGGAATCTGTTTTGATGTTGGCAATTGTAACAGGATTATGGTATTGGTTTGCA
GCAGGTCTTGCAGGGTATAC

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Sor; EIII-B-Sor; PTS system sorbose-specific EIIB component [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVILTAEDAGQAFQNNTLGDKNI
FILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTAVSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKK
FK

Sequences:

>Translated_162_residues
MAKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVILTAEDAGQAFQNNTLGDKNI
FILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTAVSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKK
FK
>Mature_161_residues
AKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVILTAEDAGQAFQNNTLGDKNIF
ILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTAVSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKKF
K

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788120, Length=158, Percent_Identity=27.8481012658228, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI87082217, Length=152, Percent_Identity=26.9736842105263, Blast_Score=66, Evalue=9e-13,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 18030; Mature: 17899

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVI
CCEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEE
LTAEDAGQAFQNNTLGDKNIFILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTA
EECCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCEEEEEECCCCCCCCCEEEEEE
VSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKKFK
EECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
AKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVI
CEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEE
LTAEDAGQAFQNNTLGDKNIFILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTA
EECCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCEEEEEECCCCCCCCCEEEEEE
VSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKKFK
EECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]