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The map label for this gene is sorB [H]

Identifier: 126697857

GI number: 126697857

Start: 347142

End: 347639

Strand: Direct

Name: sorB [H]

Synonym: CD0285

Alternate gene names: 126697857

Gene position: 347142-347639 (Clockwise)

Preceding gene: 126697856

Following gene: 126697858

Centisome position: 8.09

GC content: 25.1

Gene sequence:

>498_bases
ATGTCTTTAGTAAAATATTGCAGATGTGATGATAGATTAATACATGGTCAAGTTATATATAAATGGGTTAAGCATCTAGG
TGTAAAAAAGATAGTAGTAGTAGATGATGAAACAACCAATGATGTTATTGCTAAAGGTTTGATAAAAATGGCAGCACCAA
AGAATATTGATTTATCAATATTAACTGTAAGTGAATCAAGGAGATATTTTTATAATAATCAAGCTGATGATAACGTTTTT
GTATTAATTAAAAATTTAGATACTGCAAATAGAATGATAGAAGAAGGGATTAATATCAAAAAACTTATTGTTGGAAGAAT
ACCTACAGGAATAGGAAAAAAGAAAATATCTCAAAATGTATACATTAATAAAAAAGAGTTTCTTTTAATAGATGAATTTA
TTAAAAAGAATATTAATGTATCAATTCAAATGGTACCTGATGAAGAAGAAGTAGAATTAAACCAAAATATTAATCGCTAT
AAAGGAGAGTTTATTTAG

Upstream 100 bases:

>100_bases
AAGAGTTAGCAGAAGCATGTATTGAAGCAGGACAAACTGGTATAAACAATATTAATAAAGTTCTTAGCTCAATGTAATAG
AAAAAGGAGTTTGATTAAAA

Downstream 100 bases:

>100_bases
CAATGAATAAATATAAGGTAATCATACTGTGCCATGGAACTTGGGGAAAAGTCTTAGTAGAAGAAACAAATAAAAACTTT
GGATTGTCAAATCAATATGA

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Sor; EIII-B-Sor; PTS system sorbose-specific EIIB component [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIAKGLIKMAAPKNIDLSILTVSESRRYFYNNQADDNVF
VLIKNLDTANRMIEEGINIKKLIVGRIPTGIGKKKISQNVYINKKEFLLIDEFIKKNINVSIQMVPDEEEVELNQNINRY
KGEFI

Sequences:

>Translated_165_residues
MSLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIAKGLIKMAAPKNIDLSILTVSESRRYFYNNQADDNVF
VLIKNLDTANRMIEEGINIKKLIVGRIPTGIGKKKISQNVYINKKEFLLIDEFIKKNINVSIQMVPDEEEVELNQNINRY
KGEFI
>Mature_164_residues
SLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIAKGLIKMAAPKNIDLSILTVSESRRYFYNNQADDNVFV
LIKNLDTANRMIEEGINIKKLIVGRIPTGIGKKKISQNVYINKKEFLLIDEFIKKNINVSIQMVPDEEEVELNQNINRYK
GEFI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788120, Length=158, Percent_Identity=27.2151898734177, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI87082217, Length=153, Percent_Identity=22.8758169934641, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789527, Length=148, Percent_Identity=28.3783783783784, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 19057; Mature: 18925

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIAKGLIKMAAPKNIDLSI
CCCHHHHCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
LTVSESRRYFYNNQADDNVFVLIKNLDTANRMIEEGINIKKLIVGRIPTGIGKKKISQNV
EEEECCCEEEECCCCCCEEEEEEECCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCE
YINKKEFLLIDEFIKKNINVSIQMVPDEEEVELNQNINRYKGEFI
EECCHHEEEEHHHHHCCCCEEEEECCCCHHHHHHCCHHCCCCCCC
>Mature Secondary Structure 
SLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIAKGLIKMAAPKNIDLSI
CCHHHHCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
LTVSESRRYFYNNQADDNVFVLIKNLDTANRMIEEGINIKKLIVGRIPTGIGKKKISQNV
EEEECCCEEEECCCCCCEEEEEEECCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCE
YINKKEFLLIDEFIKKNINVSIQMVPDEEEVELNQNINRYKGEFI
EECCHHEEEEHHHHHCCCCEEEEECCCCHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]