Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697844

Identifier: 126697844

GI number: 126697844

Start: 331899

End: 333302

Strand: Direct

Name: 126697844

Synonym: CD0272

Alternate gene names: NA

Gene position: 331899-333302 (Clockwise)

Preceding gene: 126697843

Following gene: 126697845

Centisome position: 7.74

GC content: 23.43

Gene sequence:

>1404_bases
GTGGTACTTATTTTAAACTTAAATGATATAAAAAAAGATATACTAAAACTCAATAAAAAAGACTCATGTTCTCTATATAA
TGAATCTATTAATAATATAAATAATAATTGTATATCAACTGGATTAAAATTTTTAAAACAAGCAAGAGATTTAAACCCAG
ATGATGTTGATATATTAAATCTCACAGGTCTTGTAAACTTACTAAAATGTAATTTTGATGATGCTGTAGAAAGTTTCTAT
AAGAGTTCACTTTGTGAAAAAACTGCTCTGTGTGAAAAGTATATAAACATGCTTACATCTGAGGAGTTTTTAATTTTCTT
TGAAAAGTACAATCAACTTATAAGGTTAATAAATAAAGGAATGTATAAAGAAGCTATACAAGGGTTTAAACTCATAACTG
ACCAATACTGTGATTTAATAGAACCTTATGAGTTGCTTGCCTTACTGTATGACAAGGAAGAAGAATATATAAAATTTGAT
GAATGTTTAGAAGTATTGAAGATTATTGATAAGGAAAATTATTTATTAAATCAAGAAAATAACACATTAGATATGTATAA
TAGTGCTAATATACAAACTAAAAGTAATATAAAAGTAGATGATTATAAGAATGAGTTTTTACATAAAAGTAGTAGTAATC
ATAAAATTAATGATTATAATGATGTAACTAAAGAAAAGAGTTCAAGCAAAAACCAGAAAAGTTCAGATTCTAATAAGAAA
AAAAGTATTAAAAAAAATAAGTACCTATATATAGCCATAATATTAGGAATATTATTAGTAGGACAAAGTATATATAGTTC
TTATAAGATGAATAATTTAACTGATAAAATATCTAAAAATAATGAAACTAAAAATGAAGAGTCAATAGATTCTAACTTGA
CTAAGAAAGAAAATAATATAGAAGAAAATGAAGATATGAGTAAGGCTTCTAATATAAATAAGAGTAATAAAAACATTAAT
AAAGAGGATGATGTAAAATCTAAAAAAAATACTGTAGAAAATGAAGATGATAAAGATTCTGACTTATTTACAGAGGATGA
ATTGATGTCTAAGGCGAATACTTTAAAATCAGAAAAGAAAACTAAATCTTCTATACAACTATATAAGAAAGTTGCAGATA
TAGGTGAAAATAAAGGGAATACATCTGAAGCAACTTATCAAGTTGCTATTCTCAGTGAAAAGTTAAAAGACTATAAAACT
GCTGAAGAATATTATAAAATGTATGTAGAAAATTACTCAGAAAAAGATGCTTATTTTGATGAATCTTATTATAATTTAGG
TATGATGTACTATAACAATGGTGATTTAAAAAATTCTAAATTGACATTAAAGAAGTTGGTTAATAAGGTACCAAATAGTA
TGTATAATAATTCAAAAGTAAAAGAAATTTTAAAAGAAGAATAG

Upstream 100 bases:

>100_bases
GATTTAAATTTTGGTGTAAAGATAACAAGTATAGTAAGTGAAGAAGACATGGTAAAATCTCTTGTTTAGAGATAACATCA
ATTAATACTTAAGGCATGAG

Downstream 100 bases:

>100_bases
TTAAATTAGATAAGAAAAATAAATTATTTTATTTTAAAATAATATGATTATAATATATTGACATACCATTTTAAAAAATT
TAAAATATTAATTATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKFLKQARDLNPDDVDILNLTGLVNLLKCNFDDAVESFY
KSSLCEKTALCEKYINMLTSEEFLIFFEKYNQLIRLINKGMYKEAIQGFKLITDQYCDLIEPYELLALLYDKEEEYIKFD
ECLEVLKIIDKENYLLNQENNTLDMYNSANIQTKSNIKVDDYKNEFLHKSSSNHKINDYNDVTKEKSSSKNQKSSDSNKK
KSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDKISKNNETKNEESIDSNLTKKENNIEENEDMSKASNINKSNKNIN
KEDDVKSKKNTVENEDDKDSDLFTEDELMSKANTLKSEKKTKSSIQLYKKVADIGENKGNTSEATYQVAILSEKLKDYKT
AEEYYKMYVENYSEKDAYFDESYYNLGMMYYNNGDLKNSKLTLKKLVNKVPNSMYNNSKVKEILKEE

Sequences:

>Translated_467_residues
MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKFLKQARDLNPDDVDILNLTGLVNLLKCNFDDAVESFY
KSSLCEKTALCEKYINMLTSEEFLIFFEKYNQLIRLINKGMYKEAIQGFKLITDQYCDLIEPYELLALLYDKEEEYIKFD
ECLEVLKIIDKENYLLNQENNTLDMYNSANIQTKSNIKVDDYKNEFLHKSSSNHKINDYNDVTKEKSSSKNQKSSDSNKK
KSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDKISKNNETKNEESIDSNLTKKENNIEENEDMSKASNINKSNKNIN
KEDDVKSKKNTVENEDDKDSDLFTEDELMSKANTLKSEKKTKSSIQLYKKVADIGENKGNTSEATYQVAILSEKLKDYKT
AEEYYKMYVENYSEKDAYFDESYYNLGMMYYNNGDLKNSKLTLKKLVNKVPNSMYNNSKVKEILKEE
>Mature_467_residues
MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKFLKQARDLNPDDVDILNLTGLVNLLKCNFDDAVESFY
KSSLCEKTALCEKYINMLTSEEFLIFFEKYNQLIRLINKGMYKEAIQGFKLITDQYCDLIEPYELLALLYDKEEEYIKFD
ECLEVLKIIDKENYLLNQENNTLDMYNSANIQTKSNIKVDDYKNEFLHKSSSNHKINDYNDVTKEKSSSKNQKSSDSNKK
KSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDKISKNNETKNEESIDSNLTKKENNIEENEDMSKASNINKSNKNIN
KEDDVKSKKNTVENEDDKDSDLFTEDELMSKANTLKSEKKTKSSIQLYKKVADIGENKGNTSEATYQVAILSEKLKDYKT
AEEYYKMYVENYSEKDAYFDESYYNLGMMYYNNGDLKNSKLTLKKLVNKVPNSMYNNSKVKEILKEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54248; Mature: 54248

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKFLKQARDLNPDDVDILN
CEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
LTGLVNLLKCNFDDAVESFYKSSLCEKTALCEKYINMLTSEEFLIFFEKYNQLIRLINKG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
MYKEAIQGFKLITDQYCDLIEPYELLALLYDKEEEYIKFDECLEVLKIIDKENYLLNQEN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCEECCCC
NTLDMYNSANIQTKSNIKVDDYKNEFLHKSSSNHKINDYNDVTKEKSSSKNQKSSDSNKK
CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH
KSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDKISKNNETKNEESIDSNLTKKENNI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
EENEDMSKASNINKSNKNINKEDDVKSKKNTVENEDDKDSDLFTEDELMSKANTLKSEKK
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TKSSIQLYKKVADIGENKGNTSEATYQVAILSEKLKDYKTAEEYYKMYVENYSEKDAYFD
HHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
ESYYNLGMMYYNNGDLKNSKLTLKKLVNKVPNSMYNNSKVKEILKEE
CHHHEEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKFLKQARDLNPDDVDILN
CEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
LTGLVNLLKCNFDDAVESFYKSSLCEKTALCEKYINMLTSEEFLIFFEKYNQLIRLINKG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
MYKEAIQGFKLITDQYCDLIEPYELLALLYDKEEEYIKFDECLEVLKIIDKENYLLNQEN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCEECCCC
NTLDMYNSANIQTKSNIKVDDYKNEFLHKSSSNHKINDYNDVTKEKSSSKNQKSSDSNKK
CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH
KSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDKISKNNETKNEESIDSNLTKKENNI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
EENEDMSKASNINKSNKNINKEDDVKSKKNTVENEDDKDSDLFTEDELMSKANTLKSEKK
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TKSSIQLYKKVADIGENKGNTSEATYQVAILSEKLKDYKTAEEYYKMYVENYSEKDAYFD
HHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
ESYYNLGMMYYNNGDLKNSKLTLKKLVNKVPNSMYNNSKVKEILKEE
CHHHEEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA