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The map label for this gene is fliN [H]

Identifier: 126697843

GI number: 126697843

Start: 331493

End: 331867

Strand: Direct

Name: fliN [H]

Synonym: CD0271

Alternate gene names: 126697843

Gene position: 331493-331867 (Clockwise)

Preceding gene: 126697842

Following gene: 126697844

Centisome position: 7.73

GC content: 29.87

Gene sequence:

>375_bases
ATGGACAATAGTAATCTTATTTCAGATGAAGAAGCAAAGATGTTATTAAATGATAAAGTTGAAAGTGAAGTTGATGGAGA
TGATGAGTTAGCCTTAGATGTCTCTGAAGTTAATCGAAATAATATACAAAGGATACTTGACCTTAAGTTAGAATTATCTG
TAGTTATAGGAAGAACTAAGATGACTCTAAGAGATATTTTAAATTTACATAAAGGTTCTCTTATTGAACTGGATACTTTA
GCAGACCAAGATGTGGAAATACTAATAGATAATAAGGTTTTGGCTTATGGAAAAGTAGTGGTGGTAGATTTAAATTTTGG
TGTAAAGATAACAAGTATAGTAAGTGAAGAAGACATGGTAAAATCTCTTGTTTAG

Upstream 100 bases:

>100_bases
TATTTGTAGAAAATTCAAAATCATACACAGCAACACCAGGATTTATATCAAGTAAAAAAGGTGTAAAAATAAATGATGCT
GTTGGAAAAGAGGTGTAGTT

Downstream 100 bases:

>100_bases
AGATAACATCAATTAATACTTAAGGCATGAGGTGGTACTTATTTTAAACTTAAATGATATAAAAAAAGATATACTAAAAC
TCAATAAAAAAGACTCATGT

Product: flagellar motor switch protein

Products: NA

Alternate protein names: CheY-P phosphatase FliY [H]

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQRILDLKLELSVVIGRTKMTLRDILNLHKGSLIELDTL
ADQDVEILIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMVKSLV

Sequences:

>Translated_124_residues
MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQRILDLKLELSVVIGRTKMTLRDILNLHKGSLIELDTL
ADQDVEILIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMVKSLV
>Mature_124_residues
MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQRILDLKLELSVVIGRTKMTLRDILNLHKGSLIELDTL
ADQDVEILIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMVKSLV

Specific function: Component of the flagellar switch. Binds CheY-P and increases its hydrolysis rate in vitro. May function constitutively to remove CheY-P around the flagellar switch to maintain an optimal level of CheY-P whereas CheC may function after addition of an attr

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=The switch is localized at the base of the flagellar motor, in or near the C-ring, attached to the MS-ring (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=79, Percent_Identity=40.5063291139241, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007597
- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF04509 CheC; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 13824; Mature: 13824

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQRILDLKLELSVVIGRTK
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHEEEEEEEECCCH
MTLRDILNLHKGSLIELDTLADQDVEILIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMV
HHHHHHHHHCCCCEEEEECCCCCCEEEEECCEEEEECCEEEEEECCCEEEEEECCHHHHH
KSLV
HHCC
>Mature Secondary Structure
MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQRILDLKLELSVVIGRTK
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHEEEEEEEECCCH
MTLRDILNLHKGSLIELDTLADQDVEILIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMV
HHHHHHHHHCCCCEEEEECCCCCCEEEEECCEEEEECCEEEEEECCCEEEEEECCHHHHH
KSLV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447979; 9384377; 1898932 [H]