| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is flgG [H]
Identifier: 126697841
GI number: 126697841
Start: 329825
End: 330586
Strand: Direct
Name: flgG [H]
Synonym: CD0269
Alternate gene names: 126697841
Gene position: 329825-330586 (Clockwise)
Preceding gene: 126697840
Following gene: 126697842
Centisome position: 7.69
GC content: 31.23
Gene sequence:
>762_bases ATGTACACAATGTTTTATACTAGTAAAACAGCTTTATCAGCAAATCAAAGTAAACTAGATATAATATCTAACAATATAGC AAATTCTGATTCAACAGGATATAAAAAAATAAATATGGAATATTCTGATTTAGTGGATGAAGTACTAAATAGACCATCAT ATCCTACAAATGGCAATGATATATCGACTGGAACAGGAGCTAAGGCAACAGCTCCCATGAGAAATTATGAACAAGGTGCA TTGGCTCCTACAGATAGTAAGAGTAATTTGGCAATAGATGGAGAAGGATTCTTTAGAGTGATAAGAAAAGATGGTACATA TGCATATACAAGAAATGGTGGATTTAATGTAGATGCTTTAGGTAAGATTGTAGATGATAATGGAAATATATTAGATGTCC AATTTGATGCAGGATATAACTATAATAATACAAATATAGATAGTACAAACCTGACAGTTTCAAGAAATGGAGAGCTATTC GTAGATAATAAAAAAATAGGAAAAATCAACTTATATCAACCTATAGGAACTCAAAATTTTATATCTGAAGGAGATAGTTT ATTCGTCGCAACTGATGCAGCACAGATTAAACAAGTTGAGAAAGTCGATATAGTTCAAGGCTATAGAGAGAGGTCAAATG TTTCTTTACAAGAAGAATTTGTTGACTTAATAGCCACTCAAAGAGCATTTCAAATGAACTCAAAGGGAATAAAGACAGCA GATGAAATGTGGCAAATAGCGAATAATTTAAGAGCTAAATAA
Upstream 100 bases:
>100_bases ATGAGGCAAATCAAAAGATAATTCAGGCTATGGATTCTAAATTAGCAAAAATAGCAAGTGAGATTGGTTCAGTAAGATAG GTAATAGGAGGTGAATTTTT
Downstream 100 bases:
>100_bases TTATGTAAGGTGAGGAATATTCATGAATGATATGAAAGAGTACGATTTTGGCAAACCTCAGAGTTATTCAAGAGAAAATT TAACTTGTTTAAATTTTTTA
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGNDISTGTGAKATAPMRNYEQGA LAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDALGKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELF VDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTA DEMWQIANNLRAK
Sequences:
>Translated_253_residues MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGNDISTGTGAKATAPMRNYEQGA LAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDALGKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELF VDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTA DEMWQIANNLRAK >Mature_253_residues MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGNDISTGTGAKATAPMRNYEQGA LAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDALGKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELF VDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTA DEMWQIANNLRAK
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=262, Percent_Identity=31.6793893129771, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27988; Mature: 27988
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND CEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCC ISTGTGAKATAPMRNYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCHHHH GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF CEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCCCCEEEEECCCCCCHH ISEGDSLFVATDAAQIKQVEKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTA HCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCH DEMWQIANNLRAK HHHHHHHHHHCCC >Mature Secondary Structure MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND CEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCC ISTGTGAKATAPMRNYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCHHHH GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF CEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCCCCEEEEECCCCCCHH ISEGDSLFVATDAAQIKQVEKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTA HCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCH DEMWQIANNLRAK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]