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The map label for this gene is fliM [H]

Identifier: 126697842

GI number: 126697842

Start: 330609

End: 331490

Strand: Direct

Name: fliM [H]

Synonym: CD0270

Alternate gene names: 126697842

Gene position: 330609-331490 (Clockwise)

Preceding gene: 126697841

Following gene: 126697843

Centisome position: 7.71

GC content: 28.23

Gene sequence:

>882_bases
ATGAATGATATGAAAGAGTACGATTTTGGCAAACCTCAGAGTTATTCAAGAGAAAATTTAACTTGTTTAAATTTTTTATT
AGCTGAATTTTGTAAAAAATATAAAAACTATATAATTTATGAACTTAAGTGTAATTCTAGTATGGTTGTTGATAGTATAG
ACCAAGTAAATTATCAGACTTTTTTAGATAGAGTAACTTCTTCATGCGTAGTAGTACAAAATGCAATGGAACCTGTTATG
AAAAACTTTTCTTTTAGAATAGATAGAAGTGTAGCTGATATGTGGATTGATATAACTTCTGGAGGAACTGGAGTTGTAAA
GGATAATGATAGAGAGCTTACAGAACTTGATAAAAAAGTGCTTTTACACCTTATGGATGATTTAGTAAGAAATATGCACT
TATTTGAGGGTTTTGAAAATATACAAGTATTGGATACACATACACATATTAATTTGCCACAATTATGTTCTCCAACTGCA
CCAGTATGCGTTGTAGATTTAAAAGTGCTAAATGATAATGAGTGTATTGGAAGTGTTTCTCTTTGTTTTCCATACAATGG
TTTAGAGGCTCTGTTAGAAAGTATATCTGTTATAGAATTTTTTGATAATGATGTAGGAGATGATTCAGAGGAATTTACCC
AAAAAATCTATAATAGTGTATCTAATATAGAATTATCAGTTATTGCAGAGATAGGAAAAGTATCAATTAATGTTGAGGAT
TTACTTAAACTAGAAGTTGGAGATGTAATAGTAACAAATAAAAAAATAAATGATTATATAGATATATTTGTAGAAAATTC
AAAATCATACACAGCAACACCAGGATTTATATCAAGTAAAAAAGGTGTAAAAATAAATGATGCTGTTGGAAAAGAGGTGT
AG

Upstream 100 bases:

>100_bases
GCATTTCAAATGAACTCAAAGGGAATAAAGACAGCAGATGAAATGTGGCAAATAGCGAATAATTTAAGAGCTAAATAATT
ATGTAAGGTGAGGAATATTC

Downstream 100 bases:

>100_bases
TTATGGACAATAGTAATCTTATTTCAGATGAAGAAGCAAAGATGTTATTAAATGATAAAGTTGAAAGTGAAGTTGATGGA
GATGATGAGTTAGCCTTAGA

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKCNSSMVVDSIDQVNYQTFLDRVTSSCVVVQNAMEPVM
KNFSFRIDRSVADMWIDITSGGTGVVKDNDRELTELDKKVLLHLMDDLVRNMHLFEGFENIQVLDTHTHINLPQLCSPTA
PVCVVDLKVLNDNECIGSVSLCFPYNGLEALLESISVIEFFDNDVGDDSEEFTQKIYNSVSNIELSVIAEIGKVSINVED
LLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGFISSKKGVKINDAVGKEV

Sequences:

>Translated_293_residues
MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKCNSSMVVDSIDQVNYQTFLDRVTSSCVVVQNAMEPVM
KNFSFRIDRSVADMWIDITSGGTGVVKDNDRELTELDKKVLLHLMDDLVRNMHLFEGFENIQVLDTHTHINLPQLCSPTA
PVCVVDLKVLNDNECIGSVSLCFPYNGLEALLESISVIEFFDNDVGDDSEEFTQKIYNSVSNIELSVIAEIGKVSINVED
LLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGFISSKKGVKINDAVGKEV
>Mature_293_residues
MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKCNSSMVVDSIDQVNYQTFLDRVTSSCVVVQNAMEPVM
KNFSFRIDRSVADMWIDITSGGTGVVKDNDRELTELDKKVLLHLMDDLVRNMHLFEGFENIQVLDTHTHINLPQLCSPTA
PVCVVDLKVLNDNECIGSVSLCFPYNGLEALLESISVIEFFDNDVGDDSEEFTQKIYNSVSNIELSVIAEIGKVSINVED
LLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGFISSKKGVKINDAVGKEV

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 33057; Mature: 33057

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01137 TATD_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKCNSSMVVDSIDQVNYQT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHH
FLDRVTSSCVVVQNAMEPVMKNFSFRIDRSVADMWIDITSGGTGVVKDNDRELTELDKKV
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCEEEECCCHHHHHHHHHH
LLHLMDDLVRNMHLFEGFENIQVLDTHTHINLPQLCSPTAPVCVVDLKVLNDNECIGSVS
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCEE
LCFPYNGLEALLESISVIEFFDNDVGDDSEEFTQKIYNSVSNIELSVIAEIGKVSINVED
EEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHEEECHHH
LLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGFISSKKGVKINDAVGKEV
HHHEEECCEEEECCCCCCEEEEEEECCCCEEECCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKCNSSMVVDSIDQVNYQT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHH
FLDRVTSSCVVVQNAMEPVMKNFSFRIDRSVADMWIDITSGGTGVVKDNDRELTELDKKV
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCEEEECCCHHHHHHHHHH
LLHLMDDLVRNMHLFEGFENIQVLDTHTHINLPQLCSPTAPVCVVDLKVLNDNECIGSVS
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCEE
LCFPYNGLEALLESISVIEFFDNDVGDDSEEFTQKIYNSVSNIELSVIAEIGKVSINVED
EEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHEEECHHH
LLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGFISSKKGVKINDAVGKEV
HHHEEECCEEEECCCCCCEEEEEEECCCCEEECCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1898932; 9384377; 1828465; 1447979 [H]