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The map label for this gene is flgC [H]

Identifier: 126697817

GI number: 126697817

Start: 309597

End: 310001

Strand: Direct

Name: flgC [H]

Synonym: CD0246

Alternate gene names: 126697817

Gene position: 309597-310001 (Clockwise)

Preceding gene: 126697816

Following gene: 126697818

Centisome position: 7.22

GC content: 32.59

Gene sequence:

>405_bases
ATGAGTGTGTTCAGTGGAATGAGAATATCTGCTAGTGGATTAACAGCAGAAAGTTTGAAAATGGATATCATATCATCCAA
TGTAGCTAATATAAATGCTACAAGAGGTCCAAATGGAGAAGCATATAGGAGAAAAGTTGTTTCATTTGAAGAAAACTATG
ATAATAAATTAGGTATGCTAGGAGTAAAAGTTACATCTGTTGAAGATGATAAATCACCTCTTAAAGAAGTATATGACCCA
TCTCATCCAGATGCAAAGCCAAATGGATATGTAGAATATCCAAATGTAAATATATTGGTAGAAATGACAGATTTAATAAC
AGCTTCACGAGCATATGATTCTAACGTAGATACATTGAATGCTCAGAAGTCTATGATATCAAAAGCTTTGGAAATAGGAA
AGTAG

Upstream 100 bases:

>100_bases
AATCAAGCAATGACAACATTACAATATAATGCTTTGATAAGTTTTGCAAATGGAAAAATAGCAATGACCAAATCAATAAT
AAGTGGGAGGTAATTAGAAG

Downstream 100 bases:

>100_bases
GGATAAATTATGCCAATTACACAAATTAACAATTTAATACAAGGTGCAAAGTTAGATAATTTGATTGGAGAAGCAAAGCC
ATTAACTCTTAATAATAAAG

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSVEDDKSPLKEVYDP
SHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKALEIGK

Sequences:

>Translated_134_residues
MSVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSVEDDKSPLKEVYDP
SHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKALEIGK
>Mature_133_residues
SVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSVEDDKSPLKEVYDPS
HPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKALEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=134, Percent_Identity=40.2985074626866, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14636; Mature: 14504

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGML
CCCCCCCEEECCCCCHHHEEEHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCEEE
GVKVTSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLN
EEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCCCCH
AQKSMISKALEIGK
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGML
CCCCCCEEECCCCCHHHEEEHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCEEE
GVKVTSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLN
EEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCCCCH
AQKSMISKALEIGK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]