Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is flgB [C]

Identifier: 126697816

GI number: 126697816

Start: 309272

End: 309589

Strand: Direct

Name: flgB [C]

Synonym: CD0245

Alternate gene names: 126697816

Gene position: 309272-309589 (Clockwise)

Preceding gene: 126697815

Following gene: 126697817

Centisome position: 7.21

GC content: 27.04

Gene sequence:

>318_bases
GTGAATACATATGACATTATAAAAATGGGATTAGATGCAACTAATCTAAGAAGTCAGACAATAGCAAATAATATAGCAAA
TATAAATACTGAAGGATATAAAAGACATTATATAACTTTTGAAGAAACACTAAATGATGCTATGCCTAAAATAGAAGAAA
AAACAGACAATTCTAAAGGTTTAAGAGTAGATGGTAATAATGTAGACATAGAAGAAGAAAAAGTAAATCAAGCAATGACA
ACATTACAATATAATGCTTTGATAAGTTTTGCAAATGGAAAAATAGCAATGACCAAATCAATAATAAGTGGGAGGTAA

Upstream 100 bases:

>100_bases
GATTAATTTAAATAAATAAAGAAGTCATTTTTGTAATATAGCAACTTCATTTTTTATTAATAAACAAAATAGATAAAATA
TATTTTGAGGAGGGGTGAGT

Downstream 100 bases:

>100_bases
TTAGAAGATGAGTGTGTTCAGTGGAATGAGAATATCTGCTAGTGGATTAACAGCAGAAAGTTTGAAAATGGATATCATAT
CATCCAATGTAGCTAATATA

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: Flagellar Basal-Body Rod Protein FlgB; Flagellar Basal Body Protein FlgB; Flagellar Basal-Body Rod Protein

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYITFEETLNDAMPKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMT
TLQYNALISFANGKIAMTKSIISGR

Sequences:

>Translated_105_residues
MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYITFEETLNDAMPKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMT
TLQYNALISFANGKIAMTKSIISGR
>Mature_105_residues
MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYITFEETLNDAMPKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMT
TLQYNALISFANGKIAMTKSIISGR

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11788; Mature: 11788

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYITFEETLNDAMPKIEEKTDNSKG
CCCHHEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCCCHHCCCCCCCC
LRVDGNNVDIEEEKVNQAMTTLQYNALISFANGKIAMTKSIISGR
EEECCCCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEHHHHCCC
>Mature Secondary Structure
MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYITFEETLNDAMPKIEEKTDNSKG
CCCHHEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCCCHHCCCCCCCC
LRVDGNNVDIEEEKVNQAMTTLQYNALISFANGKIAMTKSIISGR
EEECCCCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA