Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126697814

Identifier: 126697814

GI number: 126697814

Start: 305998

End: 306738

Strand: Direct

Name: 126697814

Synonym: CD0243

Alternate gene names: NA

Gene position: 305998-306738 (Clockwise)

Preceding gene: 126697813

Following gene: 126697815

Centisome position: 7.13

GC content: 25.64

Gene sequence:

>741_bases
ATGGGTAATGCAACGAGAATTTATGAAAAACATGTAGATATAAAAAAAGATACTGTTCAAGATTTTTGGAATAAACGAGC
TAAAAAGCATATTCCAGAGAATCCCTATATTTCAGTGAAATGTAATGACCAAAATCCTGATTATGCTAAAAATTTAGATA
AATATGAAAAAGAAATAATAATTCCTAAACTAAATATAACTAGAAATTCAAATATATTGGATATAGGTTGTGGGGTAGGT
AGGTTAGCTGATGATATAGTTCCTATATGTAACTATTATCTTGGGACAGATTTTGCTGAAGACTTAATATCTATTGCTAA
AAAAAGATTTTCTGATAATGACTGTGATTTTCAAGTATGTGATTTTATCAATACTCTATACGATACAAAAGTTAAATCCA
AAATGCCATTTGATACAATTCTATTGGCAGGTGTAACAATGTATATAAATGATGATGAATTAAAAATAGCATTGAAAAAT
TTATTAGGAATATTAGATAAAAAGGCAACAATATATATATCTATACCTATTGGAATAAATAAGAGATTAACTTTGAAAGA
ATTTTACTCGAAAGAATTAAATTCAGAATATAATGTTATATATAGAACTATAGAAGAATATGAAGAAATTTTAAAACCAT
TACTAGATGAAGGATTTGAAATTGTTGAAAGCAAAAGCTTCTTAACAGATATAAATCAATACTCTGATACAGAAAGGCAT
TATTTTATACTAAAGCGATAG

Upstream 100 bases:

>100_bases
ACTTAAAATAGCTCATGTTGAATTGAGGGAAATTGATACACCTGAAGAATATAATGAAGCTTTAAAATGGTATAGGAACA
AAAAATAAAGGAGATTTTAT

Downstream 100 bases:

>100_bases
TTTTAATATAAATAAAATCAAAATTAAGGTGAATCTGATGAACTATAATAAAAAAAATGAAGTTTTAAATCTTATACAAA
TACTTATAGAGGGTATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGNATRIYEKHVDIKKDTVQDFWNKRAKKHIPENPYISVKCNDQNPDYAKNLDKYEKEIIIPKLNITRNSNILDIGCGVG
RLADDIVPICNYYLGTDFAEDLISIAKKRFSDNDCDFQVCDFINTLYDTKVKSKMPFDTILLAGVTMYINDDELKIALKN
LLGILDKKATIYISIPIGINKRLTLKEFYSKELNSEYNVIYRTIEEYEEILKPLLDEGFEIVESKSFLTDINQYSDTERH
YFILKR

Sequences:

>Translated_246_residues
MGNATRIYEKHVDIKKDTVQDFWNKRAKKHIPENPYISVKCNDQNPDYAKNLDKYEKEIIIPKLNITRNSNILDIGCGVG
RLADDIVPICNYYLGTDFAEDLISIAKKRFSDNDCDFQVCDFINTLYDTKVKSKMPFDTILLAGVTMYINDDELKIALKN
LLGILDKKATIYISIPIGINKRLTLKEFYSKELNSEYNVIYRTIEEYEEILKPLLDEGFEIVESKSFLTDINQYSDTERH
YFILKR
>Mature_245_residues
GNATRIYEKHVDIKKDTVQDFWNKRAKKHIPENPYISVKCNDQNPDYAKNLDKYEKEIIIPKLNITRNSNILDIGCGVGR
LADDIVPICNYYLGTDFAEDLISIAKKRFSDNDCDFQVCDFINTLYDTKVKSKMPFDTILLAGVTMYINDDELKIALKNL
LGILDKKATIYISIPIGINKRLTLKEFYSKELNSEYNVIYRTIEEYEEILKPLLDEGFEIVESKSFLTDINQYSDTERHY
FILKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28669; Mature: 28538

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNATRIYEKHVDIKKDTVQDFWNKRAKKHIPENPYISVKCNDQNPDYAKNLDKYEKEII
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHEE
IPKLNITRNSNILDIGCGVGRLADDIVPICNYYLGTDFAEDLISIAKKRFSDNDCDFQVC
CCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHH
DFINTLYDTKVKSKMPFDTILLAGVTMYINDDELKIALKNLLGILDKKATIYISIPIGIN
HHHHHHHHHHHHCCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCC
KRLTLKEFYSKELNSEYNVIYRTIEEYEEILKPLLDEGFEIVESKSFLTDINQYSDTERH
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCE
YFILKR
EEEEEC
>Mature Secondary Structure 
GNATRIYEKHVDIKKDTVQDFWNKRAKKHIPENPYISVKCNDQNPDYAKNLDKYEKEII
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHEE
IPKLNITRNSNILDIGCGVGRLADDIVPICNYYLGTDFAEDLISIAKKRFSDNDCDFQVC
CCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHH
DFINTLYDTKVKSKMPFDTILLAGVTMYINDDELKIALKNLLGILDKKATIYISIPIGIN
HHHHHHHHHHHHCCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCC
KRLTLKEFYSKELNSEYNVIYRTIEEYEEILKPLLDEGFEIVESKSFLTDINQYSDTERH
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCE
YFILKR
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA