| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697815
Identifier: 126697815
GI number: 126697815
Start: 306767
End: 308251
Strand: Direct
Name: 126697815
Synonym: CD0244
Alternate gene names: NA
Gene position: 306767-308251 (Clockwise)
Preceding gene: 126697814
Following gene: 126697816
Centisome position: 7.15
GC content: 23.91
Gene sequence:
>1485_bases GTGAATCTGATGAACTATAATAAAAAAAATGAAGTTTTAAATCTTATACAAATACTTATAGAGGGTATTGATTACATAAA AAATAATAATTTAAGTGAATCAATAGTTAATTCATCTCTTGAAGCTATTAATTATATGAAAAAATATATAAATAACTCTG GAAGAAGCAACAAAAACTTGTTGAATTTAATTGATGAAACTTATGTAAAAATTTTAAGACTTTCCATGTATAAAAATATA AGACTTATTGAAGATTGTGAACTTATCATAAGTAATTTAAACTATTTATCAAATATAATAGAAAATAGTCTAAATAAAAA AACTAAAATTGTATTTATGCCTTATAATGCTAAAATGTGGAATAGTTTAGAAAGTATCTGGAAATCTGCGGTTTTGGATG AGCAGTGCGACTGTTATGTAGTTCCTATACCTTATTACAAGTTAATTGATACGCCTAATGGTATAACTCAGATATATACA TATGAAGGTAATGATTTTCCTGAAGATGTTCCAGTAATACATTATGATGATTTTGATTTATCTAAGGAGAAACCTGATAT AATATATGTTCATAATCAATATGATGATTGTAACAATGCTACAATGGTAGATAGTAATTATTTTTCTTATAACTTGAAAC AATATACTAATATGCTTGTATATGTTGCTTATGGAATACTTGGAACTTATCCTGTTAGTTTTTACTTAAATTTTTATGAA TTGATAGCATCTAGAAATTTTGATAAGGTTATTGTGCAATCTCCTGCATTTGAAATTATAGCAGAATGTAGTGGTATAAA TAAAAATCAAATACTAACAATGGGATCTCCAAAATTTGATTCTTTAATTTATAATTTAAAACAGAAGAATATAAATAAAA ATTATGAATCTAAATTAAAGGGTAAAATAATTTTCTTATGGACAACTAATCTAATGAAAATACCTAATGGCAAAGATGGT GTCATTGATGAAATTGAAAATGTATTTGATATTATTGAAAATAGTCAAGAGTATGGTCTTATATATAGACCACATCCATT AGAACTTGAGTATGTAAAATCTAAAGTTCCAGAATGTTTTAATAGATACAAAACTTTGCTAGATTCAATATCTATAAAAA ATAATATTATTTTAGATGACTCTGTATCTTACTATGAATCATTCAACTTATCCCATGCTTTAATAACAGATAGGTCTTCT GTATTAATAGAATATATTCAAACGAAGAAACCTATATTAATTTATGATATAGATATGGAACGTGGATATTATGATTCAAG AATATTCGATATATTTTCAAATTATGTAGTAGGAGAAGAAGATATGGATTTAATAAAATTTATGAACTTAGTAAAAAATA ATAATGATTATAAGCTAAATCAAAGATTAAATTCTTTAAATAGTGTACTATCAAATACAGATGGAAGTTGTGGTGAAAAA ATACATACTAATGTATTAGAATACGTTTTAAATAACCATATTTAG
Upstream 100 bases:
>100_bases AGCAAAAGCTTCTTAACAGATATAAATCAATACTCTGATACAGAAAGGCATTATTTTATACTAAAGCGATAGTTTTAATA TAAATAAAATCAAAATTAAG
Downstream 100 bases:
>100_bases TTAAAATTAATTAATAATTAGATAAATTTAGGCTTGGAAAGGAGTTAAAACATTATCAATTTTAATAAATATAAGATAAT AAAGGGCAAATTAATTAAAG
Product: CDP-glycerol:Poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MNLMNYNKKNEVLNLIQILIEGIDYIKNNNLSESIVNSSLEAINYMKKYINNSGRSNKNLLNLIDETYVKILRLSMYKNI RLIEDCELIISNLNYLSNIIENSLNKKTKIVFMPYNAKMWNSLESIWKSAVLDEQCDCYVVPIPYYKLIDTPNGITQIYT YEGNDFPEDVPVIHYDDFDLSKEKPDIIYVHNQYDDCNNATMVDSNYFSYNLKQYTNMLVYVAYGILGTYPVSFYLNFYE LIASRNFDKVIVQSPAFEIIAECSGINKNQILTMGSPKFDSLIYNLKQKNINKNYESKLKGKIIFLWTTNLMKIPNGKDG VIDEIENVFDIIENSQEYGLIYRPHPLELEYVKSKVPECFNRYKTLLDSISIKNNIILDDSVSYYESFNLSHALITDRSS VLIEYIQTKKPILIYDIDMERGYYDSRIFDIFSNYVVGEEDMDLIKFMNLVKNNNDYKLNQRLNSLNSVLSNTDGSCGEK IHTNVLEYVLNNHI
Sequences:
>Translated_494_residues MNLMNYNKKNEVLNLIQILIEGIDYIKNNNLSESIVNSSLEAINYMKKYINNSGRSNKNLLNLIDETYVKILRLSMYKNI RLIEDCELIISNLNYLSNIIENSLNKKTKIVFMPYNAKMWNSLESIWKSAVLDEQCDCYVVPIPYYKLIDTPNGITQIYT YEGNDFPEDVPVIHYDDFDLSKEKPDIIYVHNQYDDCNNATMVDSNYFSYNLKQYTNMLVYVAYGILGTYPVSFYLNFYE LIASRNFDKVIVQSPAFEIIAECSGINKNQILTMGSPKFDSLIYNLKQKNINKNYESKLKGKIIFLWTTNLMKIPNGKDG VIDEIENVFDIIENSQEYGLIYRPHPLELEYVKSKVPECFNRYKTLLDSISIKNNIILDDSVSYYESFNLSHALITDRSS VLIEYIQTKKPILIYDIDMERGYYDSRIFDIFSNYVVGEEDMDLIKFMNLVKNNNDYKLNQRLNSLNSVLSNTDGSCGEK IHTNVLEYVLNNHI >Mature_494_residues MNLMNYNKKNEVLNLIQILIEGIDYIKNNNLSESIVNSSLEAINYMKKYINNSGRSNKNLLNLIDETYVKILRLSMYKNI RLIEDCELIISNLNYLSNIIENSLNKKTKIVFMPYNAKMWNSLESIWKSAVLDEQCDCYVVPIPYYKLIDTPNGITQIYT YEGNDFPEDVPVIHYDDFDLSKEKPDIIYVHNQYDDCNNATMVDSNYFSYNLKQYTNMLVYVAYGILGTYPVSFYLNFYE LIASRNFDKVIVQSPAFEIIAECSGINKNQILTMGSPKFDSLIYNLKQKNINKNYESKLKGKIIFLWTTNLMKIPNGKDG VIDEIENVFDIIENSQEYGLIYRPHPLELEYVKSKVPECFNRYKTLLDSISIKNNIILDDSVSYYESFNLSHALITDRSS VLIEYIQTKKPILIYDIDMERGYYDSRIFDIFSNYVVGEEDMDLIKFMNLVKNNNDYKLNQRLNSLNSVLSNTDGSCGEK IHTNVLEYVLNNHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57599; Mature: 57599
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLMNYNKKNEVLNLIQILIEGIDYIKNNNLSESIVNSSLEAINYMKKYINNSGRSNKNL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LNLIDETYVKILRLSMYKNIRLIEDCELIISNLNYLSNIIENSLNKKTKIVFMPYNAKMW HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH NSLESIWKSAVLDEQCDCYVVPIPYYKLIDTPNGITQIYTYEGNDFPEDVPVIHYDDFDL HHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCC SKEKPDIIYVHNQYDDCNNATMVDSNYFSYNLKQYTNMLVYVAYGILGTYPVSFYLNFYE CCCCCCEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIASRNFDKVIVQSPAFEIIAECSGINKNQILTMGSPKFDSLIYNLKQKNINKNYESKLK HHHCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHC GKIIFLWTTNLMKIPNGKDGVIDEIENVFDIIENSQEYGLIYRPHPLELEYVKSKVPECF CCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHH NRYKTLLDSISIKNNIILDDSVSYYESFNLSHALITDRSSVLIEYIQTKKPILIYDIDME HHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCEEEEEECCC RGYYDSRIFDIFSNYVVGEEDMDLIKFMNLVKNNNDYKLNQRLNSLNSVLSNTDGSCGEK CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCHHH IHTNVLEYVLNNHI HHHHHHHHHHHCCC >Mature Secondary Structure MNLMNYNKKNEVLNLIQILIEGIDYIKNNNLSESIVNSSLEAINYMKKYINNSGRSNKNL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LNLIDETYVKILRLSMYKNIRLIEDCELIISNLNYLSNIIENSLNKKTKIVFMPYNAKMW HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH NSLESIWKSAVLDEQCDCYVVPIPYYKLIDTPNGITQIYTYEGNDFPEDVPVIHYDDFDL HHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCC SKEKPDIIYVHNQYDDCNNATMVDSNYFSYNLKQYTNMLVYVAYGILGTYPVSFYLNFYE CCCCCCEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIASRNFDKVIVQSPAFEIIAECSGINKNQILTMGSPKFDSLIYNLKQKNINKNYESKLK HHHCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHC GKIIFLWTTNLMKIPNGKDGVIDEIENVFDIIENSQEYGLIYRPHPLELEYVKSKVPECF CCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHH NRYKTLLDSISIKNNIILDDSVSYYESFNLSHALITDRSSVLIEYIQTKKPILIYDIDME HHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCEEEEEECCC RGYYDSRIFDIFSNYVVGEEDMDLIKFMNLVKNNNDYKLNQRLNSLNSVLSNTDGSCGEK CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCHHH IHTNVLEYVLNNHI HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA