| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697812
Identifier: 126697812
GI number: 126697812
Start: 304766
End: 305368
Strand: Direct
Name: 126697812
Synonym: CD0241
Alternate gene names: NA
Gene position: 304766-305368 (Clockwise)
Preceding gene: 126697811
Following gene: 126697813
Centisome position: 7.1
GC content: 25.37
Gene sequence:
>603_bases ATGGAAAATTATAAATTTGTTTTTGATTTAGATTCAACATTAACTAAACAAGAAATACTTCCTGAGATTTCTAAGTGTAT AAATAAATATGAACTTATGCAAAATCTTACAAATGAAACTATGCTAGGAAATTTATCTTTTGAGGAAAGTTTTAAGAAAA GAGTCGATTTATTAAAATGTATTCCTATTTCTAAAGTTAAAAGTATAGTTGCTAAGATTAATCTTAATGAAAAAATTGTA AAGTTTATAAAAGAAAATCCAGATAGATGTACTGTTGTGACAAATAATTTAGATATTTGGATTTGTGATTTAATGAAAGA GCTTTCTTTAGAAAATAAATACTATTCATCTATAGCTCATTCAAATGGTGATTTCATTGATAAAATTAAAGTTATAATAA AAAAAGAAGATATTATAAAAAAAATGAAAGGTCCTATAGTTGCAGTTGGTGATGGCAGTAATGATATAAAAATGATAGAG AATGCTGATATTGGAATTGGATTTGGAGGGGTAAGACCTATAGCTCCTGGAATATTAAAAGTATGTGATTATGCATTTTA TGAGGAGGAACGTTTATGCCAACTACTAAAACAATTGTTGTAA
Upstream 100 bases:
>100_bases ATTATAAACTCTGTAAAATTATTGAAATTTCTAACTCAATATTGTTTGATGTACTTATCACTCAAAAATAGGATTTTATG CTTCAATGAAAGGGAATGAA
Downstream 100 bases:
>100_bases ACTGTGCAGGTAGAGGAAGTAGACTAGGATTAAATTCAAATAAGTCGTTAATAGATATAGATGGAAAGCCATTAATAATA AGACAATTAGAGTGTCTTGA
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MENYKFVFDLDSTLTKQEILPEISKCINKYELMQNLTNETMLGNLSFEESFKKRVDLLKCIPISKVKSIVAKINLNEKIV KFIKENPDRCTVVTNNLDIWICDLMKELSLENKYYSSIAHSNGDFIDKIKVIIKKEDIIKKMKGPIVAVGDGSNDIKMIE NADIGIGFGGVRPIAPGILKVCDYAFYEEERLCQLLKQLL
Sequences:
>Translated_200_residues MENYKFVFDLDSTLTKQEILPEISKCINKYELMQNLTNETMLGNLSFEESFKKRVDLLKCIPISKVKSIVAKINLNEKIV KFIKENPDRCTVVTNNLDIWICDLMKELSLENKYYSSIAHSNGDFIDKIKVIIKKEDIIKKMKGPIVAVGDGSNDIKMIE NADIGIGFGGVRPIAPGILKVCDYAFYEEERLCQLLKQLL >Mature_200_residues MENYKFVFDLDSTLTKQEILPEISKCINKYELMQNLTNETMLGNLSFEESFKKRVDLLKCIPISKVKSIVAKINLNEKIV KFIKENPDRCTVVTNNLDIWICDLMKELSLENKYYSSIAHSNGDFIDKIKVIIKKEDIIKKMKGPIVAVGDGSNDIKMIE NADIGIGFGGVRPIAPGILKVCDYAFYEEERLCQLLKQLL
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 22831; Mature: 22831
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYKFVFDLDSTLTKQEILPEISKCINKYELMQNLTNETMLGNLSFEESFKKRVDLLKC CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHH IPISKVKSIVAKINLNEKIVKFIKENPDRCTVVTNNLDIWICDLMKELSLENKYYSSIAH CCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC SNGDFIDKIKVIIKKEDIIKKMKGPIVAVGDGSNDIKMIENADIGIGFGGVRPIAPGILK CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHH VCDYAFYEEERLCQLLKQLL HHHHHHCCHHHHHHHHHHHC >Mature Secondary Structure MENYKFVFDLDSTLTKQEILPEISKCINKYELMQNLTNETMLGNLSFEESFKKRVDLLKC CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHH IPISKVKSIVAKINLNEKIVKFIKENPDRCTVVTNNLDIWICDLMKELSLENKYYSSIAH CCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC SNGDFIDKIKVIIKKEDIIKKMKGPIVAVGDGSNDIKMIENADIGIGFGGVRPIAPGILK CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHH VCDYAFYEEERLCQLLKQLL HHHHHHCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]