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The map label for this gene is fliD [H]

Identifier: 126697808

GI number: 126697808

Start: 298980

End: 300503

Strand: Direct

Name: fliD [H]

Synonym: CD0237

Alternate gene names: 126697808

Gene position: 298980-300503 (Clockwise)

Preceding gene: 126697807

Following gene: 126697809

Centisome position: 6.97

GC content: 29.92

Gene sequence:

>1524_bases
ATGTCAAGTATAAGTCCAGTAAGAGTTACAGGCCTTTCAGGAAATTTTGATATGGAAGGTATAATAGAAGCTAGTATGAT
AAGAGATAAGGAAAAAGTTAATAAAGCGAAACAAGATCAACAAATAGTTAAATGGAAACAAGAAATATACAGGGATATTA
TAAAAGAGTCAAAGAATCTTTATGACAAGTATTTAAATGGAGACTCTCCTAATAGTATAACAAATAAAAAAGCATATTCT
GCTACAAGAATAACTAGTTCTGATGAAAGTATTATAGTAGCAAAAGGCTCAGCTGGTGCAGAAAAAATAAATTATCAATT
TGCAGTTTCTCAAATGGCTGAACCAGCAAAAGTAACTATTAAGTTAAATTCAAGTGACCCTATTGTTCAACAGTTTCCTC
CAAATGCTAGTGGAGCAAGTTCTTTAAATATAGGTGGTGTAAATATACCAATATCTGAACAAGATACTACAAGTACTATT
GTAAGTAAGATAAACTCCCTTTGTGCAGATAATGATATAAGAGCTTCTTATAGTGAGATGACAGGTGAATTGATTATCTC
AAGAAAACAGACTGGTTCATCATCAGATATTGATTTAAAAGTAATTGGAAATGATAGTTTAGCTGGACAAATTGCCAGTG
ATAATGGTATTACATTTACAACTGATGCTAGTGGAACTAAATCTGCAGTAGTATATGGAAAAAATTTAGAAGCTGATGTA
ACTGATGACCAAGGAAGAGTAACACACATAAGTAAAGAACAGAATTCATTTAAAATAGATAACATTGATTATAATGTAAA
TTCAAAAGGAAGTGCTAAACTGGTTTCTGTTACTGACACTGAAGAAGCTACTAAAAATATGAAAGCATTTGTAGATGATT
ATAATGCATTGATGGATAAGGTTTATGGATTAGTTACTACTAAAAAATCAAAAGATTATCCACCTCTTACAGATGAACAA
AAAGATGATATGACAACTGAAGAAATAGAAAAGTGGGAAAAGAAGGCAAAGGAAGGAATACTTAGAAATGATGATGAATT
AAGAGCTTTTGTTGAAGATATTCAGTCTATGTTTTTTGGAGATGCAGATACTATTATTGCTTTAAGAAAACTGGGTATTA
GTGAGCATGAGAATTATAACAAAAAAGGACAAATATCATTTAATGCAGATACTTTTTCGAAGGCTCTTATAGATGATAGT
GACAAGGTATATAAAGCTTTAGCTGGATATTCTTCAAATTATGATGATAAGGGTATGTTTGAAAAATTAAAAAAAATTGT
ATTTGAATATTCTGGAAGTTCAGCTTCTAAACTTACTAAAAAAGCAGGTATGGAAAATTCTTCGTCTGCTAGTCAAAATG
TATATTCAAAACAAATTGCAGAGCAAGAAAGAAATATAAGTAGGTTAGTTGAAAAAATGAATGATAAAGAGAAAAGACTT
TATGCTAAATATTCAGCTTTAGAGTCTTTGTTGAATAAATATTCTTCACAAATGAACTATTTCTCACAAGCACAAGGTAA
TTAA

Upstream 100 bases:

>100_bases
AATAATTGATGATATATTGCCAATAGTAGAACAAATAAGAGATACATGGCATGAAGTGTATAATAAACTATAACTATAAT
CATGATGGGGGGATAAACAT

Downstream 100 bases:

>100_bases
TTATGGACAAGTTAGAAGAAAAAATAAATTTATATAAAGATATATCTTTAAAAATTATAAATTTTATTGAAAAAATGGAG
TATAAAAATATAAGTTTTCA

Product: flagellar cap protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MSSISPVRVTGLSGNFDMEGIIEASMIRDKEKVNKAKQDQQIVKWKQEIYRDIIKESKNLYDKYLNGDSPNSITNKKAYS
ATRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKVTIKLNSSDPIVQQFPPNASGASSLNIGGVNIPISEQDTTSTI
VSKINSLCADNDIRASYSEMTGELIISRKQTGSSSDIDLKVIGNDSLAGQIASDNGITFTTDASGTKSAVVYGKNLEADV
TDDQGRVTHISKEQNSFKIDNIDYNVNSKGSAKLVSVTDTEEATKNMKAFVDDYNALMDKVYGLVTTKKSKDYPPLTDEQ
KDDMTTEEIEKWEKKAKEGILRNDDELRAFVEDIQSMFFGDADTIIALRKLGISEHENYNKKGQISFNADTFSKALIDDS
DKVYKALAGYSSNYDDKGMFEKLKKIVFEYSGSSASKLTKKAGMENSSSASQNVYSKQIAEQERNISRLVEKMNDKEKRL
YAKYSALESLLNKYSSQMNYFSQAQGN

Sequences:

>Translated_507_residues
MSSISPVRVTGLSGNFDMEGIIEASMIRDKEKVNKAKQDQQIVKWKQEIYRDIIKESKNLYDKYLNGDSPNSITNKKAYS
ATRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKVTIKLNSSDPIVQQFPPNASGASSLNIGGVNIPISEQDTTSTI
VSKINSLCADNDIRASYSEMTGELIISRKQTGSSSDIDLKVIGNDSLAGQIASDNGITFTTDASGTKSAVVYGKNLEADV
TDDQGRVTHISKEQNSFKIDNIDYNVNSKGSAKLVSVTDTEEATKNMKAFVDDYNALMDKVYGLVTTKKSKDYPPLTDEQ
KDDMTTEEIEKWEKKAKEGILRNDDELRAFVEDIQSMFFGDADTIIALRKLGISEHENYNKKGQISFNADTFSKALIDDS
DKVYKALAGYSSNYDDKGMFEKLKKIVFEYSGSSASKLTKKAGMENSSSASQNVYSKQIAEQERNISRLVEKMNDKEKRL
YAKYSALESLLNKYSSQMNYFSQAQGN
>Mature_506_residues
SSISPVRVTGLSGNFDMEGIIEASMIRDKEKVNKAKQDQQIVKWKQEIYRDIIKESKNLYDKYLNGDSPNSITNKKAYSA
TRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKVTIKLNSSDPIVQQFPPNASGASSLNIGGVNIPISEQDTTSTIV
SKINSLCADNDIRASYSEMTGELIISRKQTGSSSDIDLKVIGNDSLAGQIASDNGITFTTDASGTKSAVVYGKNLEADVT
DDQGRVTHISKEQNSFKIDNIDYNVNSKGSAKLVSVTDTEEATKNMKAFVDDYNALMDKVYGLVTTKKSKDYPPLTDEQK
DDMTTEEIEKWEKKAKEGILRNDDELRAFVEDIQSMFFGDADTIIALRKLGISEHENYNKKGQISFNADTFSKALIDDSD
KVYKALAGYSSNYDDKGMFEKLKKIVFEYSGSSASKLTKKAGMENSSSASQNVYSKQIAEQERNISRLVEKMNDKEKRLY
AKYSALESLLNKYSSQMNYFSQAQGN

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 56077; Mature: 55946

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSISPVRVTGLSGNFDMEGIIEASMIRDKEKVNKAKQDQQIVKWKQEIYRDIIKESKNL
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDKYLNGDSPNSITNKKAYSATRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKVTI
HHHHCCCCCCCCCCCCHHHCEEEECCCCCEEEEEECCCCCHHHHHEEEHHHCCCCEEEEE
KLNSSDPIVQQFPPNASGASSLNIGGVNIPISEQDTTSTIVSKINSLCADNDIRASYSEM
EECCCCCHHHHCCCCCCCCCEECCCCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
TGELIISRKQTGSSSDIDLKVIGNDSLAGQIASDNGITFTTDASGTKSAVVYGKNLEADV
CCHHEEEECCCCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCEEEEECCCCCCCC
TDDQGRVTHISKEQNSFKIDNIDYNVNSKGSAKLVSVTDTEEATKNMKAFVDDYNALMDK
CCCCCCEEEEECCCCCEEECCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
VYGLVTTKKSKDYPPLTDEQKDDMTTEEIEKWEKKAKEGILRNDDELRAFVEDIQSMFFG
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
DADTIIALRKLGISEHENYNKKGQISFNADTFSKALIDDSDKVYKALAGYSSNYDDKGMF
CHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH
EKLKKIVFEYSGSSASKLTKKAGMENSSSASQNVYSKQIAEQERNISRLVEKMNDKEKRL
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YAKYSALESLLNKYSSQMNYFSQAQGN
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSISPVRVTGLSGNFDMEGIIEASMIRDKEKVNKAKQDQQIVKWKQEIYRDIIKESKNL
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDKYLNGDSPNSITNKKAYSATRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKVTI
HHHHCCCCCCCCCCCCHHHCEEEECCCCCEEEEEECCCCCHHHHHEEEHHHCCCCEEEEE
KLNSSDPIVQQFPPNASGASSLNIGGVNIPISEQDTTSTIVSKINSLCADNDIRASYSEM
EECCCCCHHHHCCCCCCCCCEECCCCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
TGELIISRKQTGSSSDIDLKVIGNDSLAGQIASDNGITFTTDASGTKSAVVYGKNLEADV
CCHHEEEECCCCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCEEEEECCCCCCCC
TDDQGRVTHISKEQNSFKIDNIDYNVNSKGSAKLVSVTDTEEATKNMKAFVDDYNALMDK
CCCCCCEEEEECCCCCEEECCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
VYGLVTTKKSKDYPPLTDEQKDDMTTEEIEKWEKKAKEGILRNDDELRAFVEDIQSMFFG
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
DADTIIALRKLGISEHENYNKKGQISFNADTFSKALIDDSDKVYKALAGYSSNYDDKGMF
CHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH
EKLKKIVFEYSGSSASKLTKKAGMENSSSASQNVYSKQIAEQERNISRLVEKMNDKEKRL
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YAKYSALESLLNKYSSQMNYFSQAQGN
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]