| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126697809
Identifier: 126697809
GI number: 126697809
Start: 300506
End: 300841
Strand: Direct
Name: 126697809
Synonym: CD0238
Alternate gene names: NA
Gene position: 300506-300841 (Clockwise)
Preceding gene: 126697808
Following gene: 126697810
Centisome position: 7.0
GC content: 21.43
Gene sequence:
>336_bases ATGGACAAGTTAGAAGAAAAAATAAATTTATATAAAGATATATCTTTAAAAATTATAAATTTTATTGAAAAAATGGAGTA TAAAAATATAAGTTTTCAATTAGATGAGAGACAAAACATTATAGATAGTATAAGTGAAGTTGATAAAAGTGAATTTATAC AACTTTATGATAGTATGGAGCTATTTGAAATTGATGCTAAGATAAGAGATGCTTTGCAAGAACAATTATCAGAAGTAAAA AAAGAATTACATGAGTACAAGCTTACTAAACAGGTAAACACAATGTATTATAGTTCAAATAGAGAAAAAGTAAATATTTT TAATAAAAAAGTATAA
Upstream 100 bases:
>100_bases AAGAGAAAAGACTTTATGCTAAATATTCAGCTTTAGAGTCTTTGTTGAATAAATATTCTTCACAAATGAACTATTTCTCA CAAGCACAAGGTAATTAATT
Downstream 100 bases:
>100_bases AGTTATAGATTAACTTGTCCGATAATATAAACGGATAGTTAATACAAAAGTTAAAAGTAGAAATGACAAGGATGTCAACT ATACTAAGGAGGGTAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSMELFEIDAKIRDALQEQLSEVK KELHEYKLTKQVNTMYYSSNREKVNIFNKKV
Sequences:
>Translated_111_residues MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSMELFEIDAKIRDALQEQLSEVK KELHEYKLTKQVNTMYYSSNREKVNIFNKKV >Mature_111_residues MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSMELFEIDAKIRDALQEQLSEVK KELHEYKLTKQVNTMYYSSNREKVNIFNKKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13423; Mature: 13423
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSME CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCHH LFEIDAKIRDALQEQLSEVKKELHEYKLTKQVNTMYYSSNREKVNIFNKKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSME CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCHH LFEIDAKIRDALQEQLSEVKKELHEYKLTKQVNTMYYSSNREKVNIFNKKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA