Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697809

Identifier: 126697809

GI number: 126697809

Start: 300506

End: 300841

Strand: Direct

Name: 126697809

Synonym: CD0238

Alternate gene names: NA

Gene position: 300506-300841 (Clockwise)

Preceding gene: 126697808

Following gene: 126697810

Centisome position: 7.0

GC content: 21.43

Gene sequence:

>336_bases
ATGGACAAGTTAGAAGAAAAAATAAATTTATATAAAGATATATCTTTAAAAATTATAAATTTTATTGAAAAAATGGAGTA
TAAAAATATAAGTTTTCAATTAGATGAGAGACAAAACATTATAGATAGTATAAGTGAAGTTGATAAAAGTGAATTTATAC
AACTTTATGATAGTATGGAGCTATTTGAAATTGATGCTAAGATAAGAGATGCTTTGCAAGAACAATTATCAGAAGTAAAA
AAAGAATTACATGAGTACAAGCTTACTAAACAGGTAAACACAATGTATTATAGTTCAAATAGAGAAAAAGTAAATATTTT
TAATAAAAAAGTATAA

Upstream 100 bases:

>100_bases
AAGAGAAAAGACTTTATGCTAAATATTCAGCTTTAGAGTCTTTGTTGAATAAATATTCTTCACAAATGAACTATTTCTCA
CAAGCACAAGGTAATTAATT

Downstream 100 bases:

>100_bases
AGTTATAGATTAACTTGTCCGATAATATAAACGGATAGTTAATACAAAAGTTAAAAGTAGAAATGACAAGGATGTCAACT
ATACTAAGGAGGGTAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSMELFEIDAKIRDALQEQLSEVK
KELHEYKLTKQVNTMYYSSNREKVNIFNKKV

Sequences:

>Translated_111_residues
MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSMELFEIDAKIRDALQEQLSEVK
KELHEYKLTKQVNTMYYSSNREKVNIFNKKV
>Mature_111_residues
MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSMELFEIDAKIRDALQEQLSEVK
KELHEYKLTKQVNTMYYSSNREKVNIFNKKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13423; Mature: 13423

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSME
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCHH
LFEIDAKIRDALQEQLSEVKKELHEYKLTKQVNTMYYSSNREKVNIFNKKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MDKLEEKINLYKDISLKIINFIEKMEYKNISFQLDERQNIIDSISEVDKSEFIQLYDSME
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCHH
LFEIDAKIRDALQEQLSEVKKELHEYKLTKQVNTMYYSSNREKVNIFNKKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA