| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is purG [H]
Identifier: 126697792
GI number: 126697792
Start: 284276
End: 285352
Strand: Direct
Name: purG [H]
Synonym: CD0221
Alternate gene names: 126697792
Gene position: 284276-285352 (Clockwise)
Preceding gene: 126697791
Following gene: 126697793
Centisome position: 6.63
GC content: 31.75
Gene sequence:
>1077_bases ATGTTAACATATAAAGAATCAGGTGTAGATATAGATGAAGGAAATAGAGCAGTAGACCTTATAAAAGGTAAAATAAAAGG AACTTATGATGGAAATGTAGTTGGAGATTTAGGTAACTTCAGTGGATTATACAGTTTAAAAGATTTTGTAGGTATGAAAG AACCAGTTTTGCTTGCATCTACAGATGGTGTTGGGACTAAGTTAAAAATAGCTCAGATGATGGACAAGCATGATACTGTT GGAATAGATTTAGTTGCAATGTGCGTGAATGATTTAATTTGTCAAGGAGCAAAACCATTATTCTTCCTTGACTATATAGC TCTTGGGAAATTAGTGCCTGAGCATATCGAAAAAATAGTTGGTGGAATTGCAGATGGTTGTAAAATGTCTGGTTGTGCAC TAATTGGTGGAGAAACTGCTGAAATGCCTGGAATGTATGGAGAAGATGACTATGATTTAGCAGGATTTTCTGTAGGAATA GCAGACAAAGAAAAGATTGTTTCTGGAAACAATGTTAAATCAGGAGATGTATTGGTTGGTATATCTTCAAGTGGAGTACA CAGCAATGGATTTTCTTTTATAAGAAAGATATTTTTAGAAACTTACAATTATAAAATGGAACAATATGTTGAAGAACTAG GAATGACAGTTGGAGAAGCACTTTTAACACCAACTAAAATATATGTTAAATTAGCTTTAGATGTATTAGCTAAACATGAC ATAAAAGCTATAGCTCACATAACTGGTGGAGGGCTTATAGAAAATATAACAAGAGTTATACCTAAAGGGTTAGGACTAGA TATCAATAAAAAATCTTGGGAGAAGCCTCCTATATTTAAAATGATAGAAGGTTTTAATGCTGTTGATGAGAGAGAACTTC ATAAGAGTTTTAACATGGGTATTGGGCTAGTTTTAATAGTAGATAAAGAAAATGCTGATGATGTTGTAAACTTTATAAAT AATAGAGAAAATGACAATGCTGATTATGTAGATAAAAAATATAGTGAATTATTAGAAGATAAAGCTTATATAATTGGTGA AGTAGTAGATAGTCATGAAGGTGTAGAATTATGCTAA
Upstream 100 bases:
>100_bases AAGGAATGTTAGATGCAACAGAACATAAGTCTACTTTCTGTAAAGCTTGTTTTGATGGAGAATACCCAGTTAAGAAAATT GATAAGGAGGAACTACTTTC
Downstream 100 bases:
>100_bases ATATAGGAGTTTTAATATCTGGTGGGGGAACAAATTTACAAGCAGTTATAGATGGTACTGAGTCTGGAGAAATAAAAGGT CAGGTTAAAGTAGTTATCTC
Product: phosphoribosylformylglycinamidine cyclo-ligase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLYSLKDFVGMKEPVLLASTDGVGTKLKIAQMMDKHDTV GIDLVAMCVNDLICQGAKPLFFLDYIALGKLVPEHIEKIVGGIADGCKMSGCALIGGETAEMPGMYGEDDYDLAGFSVGI ADKEKIVSGNNVKSGDVLVGISSSGVHSNGFSFIRKIFLETYNYKMEQYVEELGMTVGEALLTPTKIYVKLALDVLAKHD IKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKPPIFKMIEGFNAVDERELHKSFNMGIGLVLIVDKENADDVVNFIN NRENDNADYVDKKYSELLEDKAYIIGEVVDSHEGVELC
Sequences:
>Translated_358_residues MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLYSLKDFVGMKEPVLLASTDGVGTKLKIAQMMDKHDTV GIDLVAMCVNDLICQGAKPLFFLDYIALGKLVPEHIEKIVGGIADGCKMSGCALIGGETAEMPGMYGEDDYDLAGFSVGI ADKEKIVSGNNVKSGDVLVGISSSGVHSNGFSFIRKIFLETYNYKMEQYVEELGMTVGEALLTPTKIYVKLALDVLAKHD IKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKPPIFKMIEGFNAVDERELHKSFNMGIGLVLIVDKENADDVVNFIN NRENDNADYVDKKYSELLEDKAYIIGEVVDSHEGVELC >Mature_358_residues MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLYSLKDFVGMKEPVLLASTDGVGTKLKIAQMMDKHDTV GIDLVAMCVNDLICQGAKPLFFLDYIALGKLVPEHIEKIVGGIADGCKMSGCALIGGETAEMPGMYGEDDYDLAGFSVGI ADKEKIVSGNNVKSGDVLVGISSSGVHSNGFSFIRKIFLETYNYKMEQYVEELGMTVGEALLTPTKIYVKLALDVLAKHD IKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKPPIFKMIEGFNAVDERELHKSFNMGIGLVLIVDKENADDVVNFIN NRENDNADYVDKKYSELLEDKAYIIGEVVDSHEGVELC
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=355, Percent_Identity=47.3239436619718, Blast_Score=318, Evalue=4e-87, Organism=Homo sapiens, GI209869995, Length=355, Percent_Identity=47.3239436619718, Blast_Score=318, Evalue=4e-87, Organism=Homo sapiens, GI209869993, Length=355, Percent_Identity=47.3239436619718, Blast_Score=318, Evalue=4e-87, Organism=Escherichia coli, GI1788845, Length=324, Percent_Identity=48.7654320987654, Blast_Score=310, Evalue=7e-86, Organism=Caenorhabditis elegans, GI17567511, Length=359, Percent_Identity=39.2757660167131, Blast_Score=220, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6321203, Length=319, Percent_Identity=46.3949843260188, Blast_Score=273, Evalue=2e-74, Organism=Drosophila melanogaster, GI24582400, Length=268, Percent_Identity=42.910447761194, Blast_Score=222, Evalue=4e-58,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 38918; Mature: 38918
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLYSLKDFVGMKEPVLLAS CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEE TDGVGTKLKIAQMMDKHDTVGIDLVAMCVNDLICQGAKPLFFLDYIALGKLVPEHIEKIV CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GGIADGCKMSGCALIGGETAEMPGMYGEDDYDLAGFSVGIADKEKIVSGNNVKSGDVLVG HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEEEE ISSSGVHSNGFSFIRKIFLETYNYKMEQYVEELGMTVGEALLTPTKIYVKLALDVLAKHD ECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKPPIFKMIEGFNAVDERELHKSFNMG HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCC IGLVLIVDKENADDVVNFINNRENDNADYVDKKYSELLEDKAYIIGEVVDSHEGVELC EEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLYSLKDFVGMKEPVLLAS CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEE TDGVGTKLKIAQMMDKHDTVGIDLVAMCVNDLICQGAKPLFFLDYIALGKLVPEHIEKIV CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GGIADGCKMSGCALIGGETAEMPGMYGEDDYDLAGFSVGIADKEKIVSGNNVKSGDVLVG HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEEEE ISSSGVHSNGFSFIRKIFLETYNYKMEQYVEELGMTVGEALLTPTKIYVKLALDVLAKHD ECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKPPIFKMIEGFNAVDERELHKSFNMG HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCC IGLVLIVDKENADDVVNFINNRENDNADYVDKKYSELLEDKAYIIGEVVDSHEGVELC EEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA