| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is adk
Identifier: 126697661
GI number: 126697661
Start: 113228
End: 113878
Strand: Direct
Name: adk
Synonym: CD0091
Alternate gene names: 126697661
Gene position: 113228-113878 (Clockwise)
Preceding gene: 126697660
Following gene: 126697662
Centisome position: 2.64
GC content: 32.26
Gene sequence:
>651_bases ATGAGAATAATATTACTTGGACCTCCAGGTGCTGGTAAAGGTACTCAGGCGGTAGGAATAGTAGAAAAATACAATATACC TCATATATCAACAGGAGATATATTCAGAAAGAATATAAAAGAGGGAACAGAACTTGGAAAAAAAGCTAAAGAATACATGG ACCAAGGTTTATTAGTACCAGATGAGTTAACTGTAGGTTTAGTTACTGATAGAATATCTCAAGAAGATTGTAAAAATGGA TTTATGTTAGATGGATTTCCAAGAAATGTAGCACAAGGAGAACATTTAGATATCTTCTTAAAAAATGCTGGTATATCACT AGATAAAGTTGTCAATATTGAAGTTGATAAGAGTATATTAGTGTCTAGAGCAGTTGGTAGAAGAATATGTAAGTCTTGTG GAGCTACTTACCATGTTGAGTTTAATCCTCCTAAAGTAGAAGGTGTATGTGATGTATGCCAAGGAGAATTATATCAAAGA GCTGATGATAATGAAGAAACTGTATCTAAGAGAATACAAGTTTATCTAGATGAAACTAAGCCTTTAGTAGATTATTATAG CAAACAAGGTATAATAGCAGATATAAAAGGTGATCAAGCAATAGATAAAGTATTTGAAGATATTGTCGCAGCCTTAGGAA GTGGAAAATAA
Upstream 100 bases:
>100_bases ATCGTTGTTGGAGTTGCTTTGGAGCTTAAGAGACAGTTAGAGTCAAACTTAGTTATGAGAAGCTATCAAGGTTTCTTAAA ATAAAATGGAGATGGATAAT
Downstream 100 bases:
>100_bases ATGATTATCTTGAAATCAAAAAAAGAAATAGAACTTTTAAGAGAAGCAGGTAAAATAGTTGCTGACACTCATGAAGTTTT AAGAAAAGCTATTTCTCCGG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRIILLGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVPDELTVGLVTDRISQEDCKNG FMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSILVSRAVGRRICKSCGATYHVEFNPPKVEGVCDVCQGELYQR ADDNEETVSKRIQVYLDETKPLVDYYSKQGIIADIKGDQAIDKVFEDIVAALGSGK
Sequences:
>Translated_216_residues MRIILLGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVPDELTVGLVTDRISQEDCKNG FMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSILVSRAVGRRICKSCGATYHVEFNPPKVEGVCDVCQGELYQR ADDNEETVSKRIQVYLDETKPLVDYYSKQGIIADIKGDQAIDKVFEDIVAALGSGK >Mature_216_residues MRIILLGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVPDELTVGLVTDRISQEDCKNG FMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSILVSRAVGRRICKSCGATYHVEFNPPKVEGVCDVCQGELYQR ADDNEETVSKRIQVYLDETKPLVDYYSKQGIIADIKGDQAIDKVFEDIVAALGSGK
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=215, Percent_Identity=44.6511627906977, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI4502013, Length=215, Percent_Identity=44.6511627906977, Blast_Score=195, Evalue=2e-50, Organism=Homo sapiens, GI19923437, Length=218, Percent_Identity=37.1559633027523, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI310110345, Length=200, Percent_Identity=35, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI53832003, Length=200, Percent_Identity=35, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI8051579, Length=200, Percent_Identity=35, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI53832001, Length=200, Percent_Identity=35, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI4502011, Length=211, Percent_Identity=32.7014218009479, Blast_Score=121, Evalue=4e-28, Organism=Homo sapiens, GI7706497, Length=212, Percent_Identity=31.6037735849057, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI22749187, Length=208, Percent_Identity=29.3269230769231, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI28144897, Length=220, Percent_Identity=28.6363636363636, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI28144899, Length=220, Percent_Identity=28.6363636363636, Blast_Score=89, Evalue=4e-18, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=52.2935779816514, Blast_Score=217, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17552384, Length=214, Percent_Identity=42.9906542056075, Blast_Score=177, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17567503, Length=212, Percent_Identity=32.0754716981132, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17537943, Length=214, Percent_Identity=29.9065420560748, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17533833, Length=207, Percent_Identity=28.5024154589372, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17550688, Length=215, Percent_Identity=25.5813953488372, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320432, Length=214, Percent_Identity=45.3271028037383, Blast_Score=203, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321018, Length=205, Percent_Identity=38.0487804878049, Blast_Score=145, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6322828, Length=213, Percent_Identity=25.8215962441315, Blast_Score=91, Evalue=1e-19, Organism=Drosophila melanogaster, GI22026816, Length=205, Percent_Identity=45.3658536585366, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI17737899, Length=200, Percent_Identity=40.5, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI24645822, Length=200, Percent_Identity=40.5, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI24663208, Length=211, Percent_Identity=27.0142180094787, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI17647141, Length=211, Percent_Identity=27.0142180094787, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI221459597, Length=209, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356893, Length=209, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_CLOD6 (Q18CH9)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001086558.1 - ProteinModelPortal: Q18CH9 - SMR: Q18CH9 - STRING: Q18CH9 - GeneID: 4916513 - GenomeReviews: AM180355_GR - KEGG: cdf:CD0091 - NMPDR: fig|1496.1.peg.3631 - eggNOG: COG0563 - HOGENOM: HBG630208 - OMA: CGEGYHD - ProtClustDB: PRK00279 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23700; Mature: 23700
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVP CEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DELTVGLVTDRISQEDCKNGFMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSIL CCCEEEHHHHHCCHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCCHHEEEEEECHHHH VSRAVGRRICKSCGATYHVEFNPPKVEGVCDVCQGELYQRADDNEETVSKRIQVYLDETK HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCC PLVDYYSKQGIIADIKGDQAIDKVFEDIVAALGSGK HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIILLGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVP CEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DELTVGLVTDRISQEDCKNGFMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSIL CCCEEEHHHHHCCHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCCHHEEEEEECHHHH VSRAVGRRICKSCGATYHVEFNPPKVEGVCDVCQGELYQRADDNEETVSKRIQVYLDETK HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCC PLVDYYSKQGIIADIKGDQAIDKVFEDIVAALGSGK HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA