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The map label for this gene is nusG [H]

Identifier: 126697627

GI number: 126697627

Start: 85583

End: 86125

Strand: Direct

Name: nusG [H]

Synonym: CD0060

Alternate gene names: 126697627

Gene position: 85583-86125 (Clockwise)

Preceding gene: 126697626

Following gene: 126697628

Centisome position: 1.99

GC content: 33.15

Gene sequence:

>543_bases
ATGTCAGAATTACAAGAAGCAAGTTGGTATGTAGTTCATACCTATTCGGGACATGAAAATAAAGTTAAAGCTACAATTGA
GAAAGCAGTTAAAACAAGAGGTATGGAAGACTGCATAAGACAAGTAGTTGTTCCAACAGAAGAAGTAGTGGAAACTACTA
AAACTGGAAAAGAAAAAACTAGACAACGTAAAGTTTATCCAAGTTATGTTTTGGTTAAAATGATAATAACTGATGAATCT
TGGTATGTAGTAAGAAATACTAAGGGAGTTACAGGTTTCGTTGGACCTGGTTCAAAACCAGTGCCATTAAGTGAAGACGA
AGTCAAAGCTATGGGGATAGACACAACAGATCCTAAAGTAGTAAATAGCGATATTGATTTTGAAATAGGAGATACAGTAA
AAGTATCTCAAGGACCATTTAGTGGACAAATAGGTAACATAGAAGAAATTGACTTAGAAAATAGAGAAGTCAAAGTATGC
ATAAATGCATTTGGTAAAAGGACTCTATTTGTAATAGAGCTTGAAGGTATAGAAAAAATCTAA

Upstream 100 bases:

>100_bases
ACTGTAGTTATTTCATGCACTATATTAGTATGGGGTATAGACACTATATTATCTGGTGCACTAGCGTTATTACTAAAATA
GACGAAAAGAGGTAAGTTAA

Downstream 100 bases:

>100_bases
TACTATATTATAGAAAAATCTGAGGAGGTGCGCTCAAAATGGCTAAAAAAGTTATAGGTCAAATAAAATTACAAATACCT
GCAGGAAAGGCTACTCCAGC

Product: transcription antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVVPTEEVVETTKTGKEKTRQRKVYPSYVLVKMIITDES
WYVVRNTKGVTGFVGPGSKPVPLSEDEVKAMGIDTTDPKVVNSDIDFEIGDTVKVSQGPFSGQIGNIEEIDLENREVKVC
INAFGKRTLFVIELEGIEKI

Sequences:

>Translated_180_residues
MSELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVVPTEEVVETTKTGKEKTRQRKVYPSYVLVKMIITDES
WYVVRNTKGVTGFVGPGSKPVPLSEDEVKAMGIDTTDPKVVNSDIDFEIGDTVKVSQGPFSGQIGNIEEIDLENREVKVC
INAFGKRTLFVIELEGIEKI
>Mature_179_residues
SELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVVPTEEVVETTKTGKEKTRQRKVYPSYVLVKMIITDESW
YVVRNTKGVTGFVGPGSKPVPLSEDEVKAMGIDTTDPKVVNSDIDFEIGDTVKVSQGPFSGQIGNIEEIDLENREVKVCI
NAFGKRTLFVIELEGIEKI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=186, Percent_Identity=38.7096774193548, Blast_Score=133, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20126; Mature: 19995

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVVPTEEVVETTKTGKEKT
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCHHHH
RQRKVYPSYVLVKMIITDESWYVVRNTKGVTGFVGPGSKPVPLSEDEVKAMGIDTTDPKV
HHCCCCCCEEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEE
VNSDIDFEIGDTVKVSQGPFSGQIGNIEEIDLENREVKVCINAFGKRTLFVIELEGIEKI
ECCCCCEEECCEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
SELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVVPTEEVVETTKTGKEKT
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCHHHH
RQRKVYPSYVLVKMIITDESWYVVRNTKGVTGFVGPGSKPVPLSEDEVKAMGIDTTDPKV
HHCCCCCCEEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEE
VNSDIDFEIGDTVKVSQGPFSGQIGNIEEIDLENREVKVCINAFGKRTLFVIELEGIEKI
ECCCCCEEECCEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]