Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is secE [C]

Identifier: 126697626

GI number: 126697626

Start: 85342

End: 85563

Strand: Direct

Name: secE [C]

Synonym: CD0059

Alternate gene names: 126697626

Gene position: 85342-85563 (Clockwise)

Preceding gene: 126697625

Following gene: 126697627

Centisome position: 1.99

GC content: 30.63

Gene sequence:

>222_bases
ATGGCTGCCCAAAAAAATGACGGTGCAAAAACTAAAAAAAGGTTTAGTTTGTTTGGATACTTAAAAGAAACTAAACAAGA
ATTAAAAAGAGTTACATGGCCGACAAAAAAGGAACTGTTTAAAAACACAAGTATAGTTTTAACTGTAGTTATTTCATGCA
CTATATTAGTATGGGGTATAGACACTATATTATCTGGTGCACTAGCGTTATTACTAAAATAG

Upstream 100 bases:

>100_bases
AATCCAGACAGAATAGAATTACAAAAATATTGTAGATTCTGTAAAAAGCATACAACTCATAAAGAAACAAAATAGTTTTT
TATAAGGATGTGAGTATGGA

Downstream 100 bases:

>100_bases
ACGAAAAGAGGTAAGTTAAATGTCAGAATTACAAGAAGCAAGTTGGTATGTAGTTCATACCTATTCGGGACATGAAAATA
AAGTTAAAGCTACAATTGAG

Product: preprotein translocase SecE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTSIVLTVVISCTILVWGIDTILSGALALLLK

Sequences:

>Translated_73_residues
MAAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTSIVLTVVISCTILVWGIDTILSGALALLLK
>Mature_72_residues
AAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTSIVLTVVISCTILVWGIDTILSGALALLLK

Specific function: Essential For Protein Export. [C]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8198; Mature: 8067

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTSIVLTVVISCTILVWGI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
DTILSGALALLLK
HHHHHHHHHHHCC
>Mature Secondary Structure 
AAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTSIVLTVVISCTILVWGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
DTILSGALALLLK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA